Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 DBP10YDL031W 2988 nt2.52□□□□□ -2.01
TY1A-MR1Q04215 SIN3YOL004W 4611 nt2.52□□□□□ -2.01
TY1A-MR1Q04215 SAP185YJL098W 3177 nt2.52□□□□□ -2.01
TY1A-MR1Q04215 ILS1YBL076C 3219 nt2.52□□□□□ -2.01
TY1A-MR1Q04215 NUP157YER105C 4176 nt2.52□□□□□ -2.01
TY1A-MR1Q04215 RPO41YFL036W 4056 nt2.52□□□□□ -2.01
TY1A-MR1Q04215 JSN1YJR091C 3276 nt2.51□□□□□ -2.01
TY1A-MR1Q04215 CBF2YGR140W 2871 nt2.51□□□□□ -2.01
TY1A-MR1Q04215 LRG1YDL240W 3054 nt2.51□□□□□ -2.01
TY1A-MR1Q04215 INP51YIL002C 2841 nt2.51□□□□□ -2.01
TY1A-MR1Q04215 ORC3YLL004W 1851 nt2.51□□□□□ -2.01
TY1A-MR1Q04215 ASE1YOR058C 2658 nt2.5□□□□□ -2.01
TY1A-MR1Q04215 BUB1YGR188C 3066 nt2.49□□□□□ -2.01
TY1A-MR1Q04215 POL3YDL102W 3294 nt2.49□□□□□ -2.01
TY1A-MR1Q04215 YGR146C-AYGR146C-A 162 nt2.49□□□□□ -2.01
TY1A-MR1Q04215 YBR196C-AYBR196C-A 150 nt2.49□□□□□ -2.01
TY1A-MR1Q04215 SLI15YBR156C 2097 nt2.49□□□□□ -2.01
TY1A-MR1Q04215 MSH5YDL154W 2706 nt2.48□□□□□ -2.01
TY1A-MR1Q04215 SLH1YGR271W 5904 nt2.48□□□□□ -2.01
TY1A-MR1Q04215 RPA190YOR341W 4995 nt2.48□□□□□ -2.01
TY1A-MR1Q04215 snR75snR75 89 nt2.48□□□□□ -2.01
TY1A-MR1Q04215 TBS1YBR150C 3285 nt2.48□□□□□ -2.01
TY1A-MR1Q04215 CYR1YJL005W 6081 nt2.47□□□□□ -2.01
TY1A-MR1Q04215 YHR086W-AYHR086W-A 162 nt2.47□□□□□ -2.01
TY1A-MR1Q04215 BUD2YKL092C 3315 nt2.47□□□□□ -2.01
TY1A-MR1Q04215 RTP1YMR185W 2946 nt2.46□□□□□ -2.02
TY1A-MR1Q04215 TOR1YJR066W 7413 nt2.46□□□□□ -2.02
TY1A-MR1Q04215 AXL1YPR122W 3627 nt2.46□□□□□ -2.02
TY1A-MR1Q04215 SVL3YPL032C 2478 nt2.45□□□□□ -2.02
TY1A-MR1Q04215 ADR1YDR216W 3972 nt2.45□□□□□ -2.02
TY1A-MR1Q04215 YLR286W-AYLR286W-A 135 nt2.45□□□□□ -2.02
TY1A-MR1Q04215 RSM22YKL155C 1887 nt2.45□□□□□ -2.02
TY1A-MR1Q04215 YML002WYML002W 2214 nt2.45□□□□□ -2.02
TY1A-MR1Q04215 SAP1YER047C 2694 nt2.44□□□□□ -2.02
TY1A-MR1Q04215 YDR209CYDR209C 414 nt2.44□□□□□ -2.02
TY1A-MR1Q04215 MSB2YGR014W 3921 nt2.44□□□□□ -2.02
TY1A-MR1Q04215 SCP160YJL080C 3669 nt2.43□□□□□ -2.02
TY1A-MR1Q04215 YKL096C-BYKL096C-B 150 nt2.43□□□□□ -2.02
TY1A-MR1Q04215 YJR039WYJR039W 3366 nt2.43□□□□□ -2.02
TY1A-MR1Q04215 AGC1YPR021C 2709 nt2.43□□□□□ -2.02
TY1A-MR1Q04215 FRK1YPL141C 2598 nt2.43□□□□□ -2.02
TY1A-MR1Q04215 SRB8YCR081W 4284 nt2.41□□□□□ -2.02
TY1A-MR1Q04215 MRD1YPR112C 2664 nt2.41□□□□□ -2.02
TY1A-MR1Q04215 SEC21YNL287W 2808 nt2.41□□□□□ -2.02
TY1A-MR1Q04215 YOR296WYOR296W 3870 nt2.41□□□□□ -2.02
TY1A-MR1Q04215 PRP8YHR165C 7242 nt2.41□□□□□ -2.02
TY1A-MR1Q04215 NOP9YJL010C 2001 nt2.41□□□□□ -2.02
TY1A-MR1Q04215 POL5YEL055C 3069 nt2.4□□□□□ -2.02
TY1A-MR1Q04215 NUP100YKL068W 2880 nt2.4□□□□□ -2.02
TY1A-MR1Q04215 SEC26YDR238C 2922 nt2.4□□□□□ -2.02
TY1A-MR1Q04215 CAF120YNL278W 3183 nt2.39□□□□□ -2.03
TY1A-MR1Q04215 VPS8YAL002W 3825 nt2.39□□□□□ -2.03
TY1A-MR1Q04215 CDC60YPL160W 3273 nt2.39□□□□□ -2.03
TY1A-MR1Q04215 YER172C-AYER172C-A 381 nt2.39□□□□□ -2.03
TY1A-MR1Q04215 SSN2YDR443C 4263 nt2.39□□□□□ -2.03
TY1A-MR1Q04215 AMS1YGL156W 3252 nt2.39□□□□□ -2.03
TY1A-MR1Q04215 ESL2YKR096W 3588 nt2.38□□□□□ -2.03
TY1A-MR1Q04215 TIM9YEL020W-A 264 nt2.38□□□□□ -2.03
TY1A-MR1Q04215 LCL1YPL056C 306 nt2.38□□□□□ -2.03
TY1A-MR1Q04215 YOR343W-BYOR343W-B 5313 nt2.38□□□□□ -2.03
TY1A-MR1Q04215 YGR027W-BYGR027W-B 5268 nt2.37□□□□□ -2.03
TY1A-MR1Q04215 YLR227W-BYLR227W-B 5268 nt2.37□□□□□ -2.03
TY1A-MR1Q04215 YPR158C-DYPR158C-D 5268 nt2.37□□□□□ -2.03
TY1A-MR1Q04215 COA6YMR244C-A 315 nt2.37□□□□□ -2.03
TY1A-MR1Q04215 BCK1YJL095W 4437 nt2.37□□□□□ -2.03
TY1A-MR1Q04215 BNR1YIL159W 4128 nt2.36□□□□□ -2.03
TY1A-MR1Q04215 SUP56tL(CAA)A 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 SUP53tL(CAA)C 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 tL(CAA)DtL(CAA)D 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 tL(CAA)G1tL(CAA)G1 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 SUP54tL(CAA)G2 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 tL(CAA)G3tL(CAA)G3 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 tL(CAA)KtL(CAA)K 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 tL(CAA)LtL(CAA)L 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 tL(CAA)MtL(CAA)M 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 tL(CAA)NtL(CAA)N 82 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 YLR149C-AYLR149C-A 87 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 YPL216WYPL216W 3309 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 YEF3YLR249W 3135 nt2.35□□□□□ -2.03
TY1A-MR1Q04215 SEY1YOR165W 2331 nt2.34□□□□□ -2.03
TY1A-MR1Q04215 UFD4YKL010C 4452 nt2.33□□□□□ -2.04
TY1A-MR1Q04215 CHC1YGL206C 4962 nt2.33□□□□□ -2.04
TY1A-MR1Q04215 MET18YIL128W 3099 nt2.33□□□□□ -2.04
TY1A-MR1Q04215 MMS4YBR098W 2076 nt2.33□□□□□ -2.04
TY1A-MR1Q04215 CTR9YOL145C 3234 nt2.33□□□□□ -2.04
TY1A-MR1Q04215 ESC1YMR219W 4977 nt2.32□□□□□ -2.04
TY1A-MR1Q04215 PAU10YDR542W 363 nt2.32□□□□□ -2.04
TY1A-MR1Q04215 YLR041WYLR041W 321 nt2.32□□□□□ -2.04
TY1A-MR1Q04215 PAU4YLR461W 363 nt2.32□□□□□ -2.04
TY1A-MR1Q04215 HSL1YKL101W 4557 nt2.32□□□□□ -2.04
TY1A-MR1Q04215 UBR1YGR184C 5853 nt2.31□□□□□ -2.04
TY1A-MR1Q04215 YKL225WYKL225W 348 nt2.31□□□□□ -2.04
TY1A-MR1Q04215 SEC10YLR166C 2616 nt2.31□□□□□ -2.04
TY1A-MR1Q04215 RIF1YBR275C 5751 nt2.31□□□□□ -2.04
TY1A-MR1Q04215 PDR3YBL005W 2931 nt2.31□□□□□ -2.04
TY1A-MR1Q04215 RPS29AYLR388W 171 nt2.29□□□□□ -2.04
TY1A-MR1Q04215 IRE1YHR079C 3348 nt2.29□□□□□ -2.04
TY1A-MR1Q04215 NUM1YDR150W 8247 nt2.28□□□□□ -2.04
TY1A-MR1Q04215 ARP8YOR141C 2646 nt2.28□□□□□ -2.04
TY1A-MR1Q04215 tF(GAA)DtF(GAA)D 73 nt2.28□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 164.6 ms