RNA–Protein interactions for RNA: YOR341W

RPA190, Transcript of RNA polymerase I largest subunit A190, yeastyeast

Gene RPA190, Length 4,995 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA190YOR341W INO80P53115 1489 aa5.41□□□□□ -1.54
RPA190YOR341W MTC1P47018 478 aaKnown RBP5.3□□□□□ -1.56
RPA190YOR341W RSE1Q04693 1361 aaKnown RBP5.2□□□□□ -1.58
RPA190YOR341W TCB3Q03640 1545 aaKnown RBP5.09□□□□□ -1.6
RPA190YOR341W SPA2P23201 1466 aaKnown RBP5.09□□□□□ -1.6
RPA190YOR341W KOG1P38873 1557 aa5.04□□□□□ -1.6
RPA190YOR341W MON2P48563 1636 aaPredicted RBP5.02□□□□□ -1.61
RPA190YOR341W SGS1P35187 1447 aa4.93□□□□□ -1.62
RPA190YOR341W DNA2P38859 1522 aa4.88□□□□□ -1.63
RPA190YOR341W RQC2Q12532 1038 aaKnown RBP4.86□□□□□ -1.63
RPA190YOR341W SWR1Q05471 1514 aa4.83□□□□□ -1.64
RPA190YOR341W DRS1P32892 752 aaKnown RBP4.83□□□□□ -1.64
RPA190YOR341W MIF2P35201 549 aa4.79□□□□□ -1.64
RPA190YOR341W SPT6P23615 1451 aaKnown RBP4.79□□□□□ -1.64
RPA190YOR341W BUD4P47136 1447 aa4.77□□□□□ -1.65
RPA190YOR341W TAF7Q05021 590 aa4.72□□□□□ -1.65
RPA190YOR341W ECM5Q03214 1411 aa4.71□□□□□ -1.66
RPA190YOR341W THO2P53552 1597 aaKnown RBP4.69□□□□□ -1.66
RPA190YOR341W ABP1P15891 592 aaKnown RBP4.68□□□□□ -1.66
RPA190YOR341W SKI3P17883 1432 aaKnown RBP4.68□□□□□ -1.66
RPA190YOR341W TAF2P23255 1407 aa4.67□□□□□ -1.66
RPA190YOR341W RTT106P40161 455 aa4.66□□□□□ -1.66
RPA190YOR341W URN1Q06525 465 aaKnown RBP4.66□□□□□ -1.66
RPA190YOR341W SCT1P32784 759 aa4.64□□□□□ -1.67
RPA190YOR341W HSL1P34244 1518 aa4.61□□□□□ -1.67
RPA190YOR341W TY1B-DR4Q07793 1604 aa4.6□□□□□ -1.67
RPA190YOR341W MDS3P53094 1487 aa4.58□□□□□ -1.68
RPA190YOR341W XRN1P22147 1528 aaKnown RBP4.58□□□□□ -1.68
RPA190YOR341W BPT1P14772 1559 aa4.57□□□□□ -1.68
RPA190YOR341W LTE1P07866 1435 aa4.56□□□□□ -1.68
RPA190YOR341W DRS2P39524 1355 aa4.55□□□□□ -1.68
RPA190YOR341W TRM732Q03496 1420 aa4.55□□□□□ -1.68
RPA190YOR341W GEA2P39993 1459 aaKnown RBP4.55□□□□□ -1.68
RPA190YOR341W STH1P32597 1359 aa4.54□□□□□ -1.68
RPA190YOR341W REV3P14284 1504 aa4.54□□□□□ -1.68
RPA190YOR341W NAP1P25293 417 aaKnown RBP4.54□□□□□ -1.68
RPA190YOR341W HIR3P47171 1648 aa4.5□□□□□ -1.69
RPA190YOR341W SIN3P22579 1536 aa4.5□□□□□ -1.69
RPA190YOR341W MET5P47169 1442 aa4.49□□□□□ -1.69
RPA190YOR341W MYO2P19524 1574 aaKnown RBP4.49□□□□□ -1.69
RPA190YOR341W SSK2P53599 1579 aa4.48□□□□□ -1.69
RPA190YOR341W YTA7P40340 1379 aa4.48□□□□□ -1.69
RPA190YOR341W YCF1P39109 1515 aaKnown RBP4.47□□□□□ -1.69
RPA190YOR341W YFR006WP43590 535 aa4.46□□□□□ -1.7
RPA190YOR341W SSN2P38931 1420 aa4.46□□□□□ -1.7
RPA190YOR341W MMS1Q06211 1407 aa4.46□□□□□ -1.7
RPA190YOR341W BFR2Q06631 534 aaKnown RBP4.45□□□□□ -1.7
RPA190YOR341W MET10P39692 1035 aa4.45□□□□□ -1.7
RPA190YOR341W TOP2P06786 1428 aaKnown RBP4.45□□□□□ -1.7
RPA190YOR341W PAF1P38351 445 aa4.43□□□□□ -1.7
RPA190YOR341W SMC4Q12267 1418 aa4.43□□□□□ -1.7
RPA190YOR341W UFD4P33202 1483 aa4.42□□□□□ -1.7
RPA190YOR341W BNR1P40450 1375 aa4.41□□□□□ -1.7
RPA190YOR341W STU1P38198 1513 aa4.39□□□□□ -1.71
RPA190YOR341W YMR196WQ04336 1088 aa4.38□□□□□ -1.71
RPA190YOR341W ESC1Q03661 1658 aaKnown RBP4.38□□□□□ -1.71
RPA190YOR341W TRM3Q07527 1436 aa4.38□□□□□ -1.71
RPA190YOR341W PEP1P32319 1579 aa4.37□□□□□ -1.71
RPA190YOR341W SAS10Q12136 610 aaPredicted RBP4.36□□□□□ -1.71
RPA190YOR341W MMS22Q06164 1454 aa4.36□□□□□ -1.71
RPA190YOR341W CHD1P32657 1468 aa4.36□□□□□ -1.71
RPA190YOR341W YPK9Q12697 1472 aa4.36□□□□□ -1.71
RPA190YOR341W IFH1P39520 1085 aa4.35□□□□□ -1.71
RPA190YOR341W MRX12P47084 519 aa4.35□□□□□ -1.71
RPA190YOR341W PAN1P32521 1480 aa4.34□□□□□ -1.71
RPA190YOR341W UBP1P25037 809 aa4.34□□□□□ -1.72
RPA190YOR341W ESP1Q03018 1630 aa4.33□□□□□ -1.72
RPA190YOR341W SCC2Q04002 1493 aa4.32□□□□□ -1.72
RPA190YOR341W LEU3P08638 886 aa4.32□□□□□ -1.72
RPA190YOR341W BUD3P25558 1636 aa4.31□□□□□ -1.72
RPA190YOR341W DNF1P32660 1571 aa4.31□□□□□ -1.72
RPA190YOR341W NUP159P40477 1460 aa4.31□□□□□ -1.72
RPA190YOR341W RKR1Q04781 1562 aa4.31□□□□□ -1.72
RPA190YOR341W PRI1P10363 409 aa4.31□□□□□ -1.72
RPA190YOR341W SPP41P38904 1435 aa4.31□□□□□ -1.72
RPA190YOR341W CKB1P43639 278 aa4.31□□□□□ -1.72
RPA190YOR341W VPS15P22219 1454 aa4.3□□□□□ -1.72
RPA190YOR341W NSR1P27476 414 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
RPA190YOR341W BUD21Q08492 214 aaPredicted RBP4.3□□□□□ -1.72
RPA190YOR341W MYO4P32492 1471 aa4.3□□□□□ -1.72
RPA190YOR341W ITT1Q04638 464 aa4.29□□□□□ -1.72
RPA190YOR341W YJL181WP46987 611 aa4.29□□□□□ -1.72
RPA190YOR341W RPO31P04051 1460 aa4.28□□□□□ -1.72
RPA190YOR341W YAP3P38749 330 aa4.28□□□□□ -1.72
RPA190YOR341W NUP170P38181 1502 aa4.27□□□□□ -1.73
RPA190YOR341W ENP1P38333 483 aaKnown RBP4.27□□□□□ -1.73
RPA190YOR341W NOP7P53261 605 aaKnown RBP4.27□□□□□ -1.73
RPA190YOR341W CDC25P04821 1589 aa4.26□□□□□ -1.73
RPA190YOR341W ATG2P53855 1592 aa4.25□□□□□ -1.73
RPA190YOR341W RPA190P10964 1664 aaKnown RBP4.25□□□□□ -1.73
RPA190YOR341W TSC11P40061 1430 aa4.24□□□□□ -1.73
RPA190YOR341W NUP157P40064 1391 aaKnown RBP4.24□□□□□ -1.73
RPA190YOR341W MAK10Q02197 733 aa4.23□□□□□ -1.73
RPA190YOR341W IQG1Q12280 1495 aa4.23□□□□□ -1.73
RPA190YOR341W PDR10P51533 1564 aa4.22□□□□□ -1.73
RPA190YOR341W CAT8P39113 1433 aa4.22□□□□□ -1.73
RPA190YOR341W YOR1P53049 1477 aa4.21□□□□□ -1.73
RPA190YOR341W POL1P13382 1468 aa4.21□□□□□ -1.74
RPA190YOR341W EDE1P34216 1381 aa4.21□□□□□ -1.74
RPA190YOR341W CFT1Q06632 1357 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms