Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PER3P56645 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.51■□□□□ 0.55
PER3P56645 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.51■□□□□ 0.55
PER3P56645 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.51■□□□□ 0.55
PER3P56645 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.51■□□□□ 0.55
PER3P56645 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PER3P56645 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
PER3P56645 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PER3P56645 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PER3P56645 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.5■□□□□ 0.55
PER3P56645 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PER3P56645 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.5■□□□□ 0.55
PER3P56645 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PER3P56645 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.5■□□□□ 0.55
PER3P56645 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
PER3P56645 Z99916.2-201ENST00000604037 246 ntBASIC18.5■□□□□ 0.55
PER3P56645 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.5■□□□□ 0.55
PER3P56645 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PER3P56645 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PER3P56645 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PER3P56645 AP001412.1-201ENST00000608405 714 ntBASIC18.49■□□□□ 0.55
PER3P56645 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PER3P56645 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PER3P56645 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PER3P56645 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.49■□□□□ 0.55
PER3P56645 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PER3P56645 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PER3P56645 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PER3P56645 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.48■□□□□ 0.55
PER3P56645 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.48■□□□□ 0.55
PER3P56645 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.48■□□□□ 0.55
PER3P56645 AC012618.2-201ENST00000428058 849 ntBASIC18.48■□□□□ 0.55
PER3P56645 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.48■□□□□ 0.55
PER3P56645 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.48■□□□□ 0.55
PER3P56645 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.48■□□□□ 0.55
PER3P56645 SOX15-203ENST00000570788 1093 ntBASIC18.48■□□□□ 0.55
PER3P56645 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.48■□□□□ 0.55
PER3P56645 AC069544.1-201ENST00000609399 999 ntBASIC18.48■□□□□ 0.55
PER3P56645 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PER3P56645 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.48■□□□□ 0.55
PER3P56645 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.48■□□□□ 0.55
PER3P56645 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
PER3P56645 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PER3P56645 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.47■□□□□ 0.55
PER3P56645 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 AC091799.1-201ENST00000422823 811 ntBASIC18.47■□□□□ 0.55
PER3P56645 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.47■□□□□ 0.55
PER3P56645 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PER3P56645 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PER3P56645 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PER3P56645 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PER3P56645 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PER3P56645 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PER3P56645 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PER3P56645 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PER3P56645 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PER3P56645 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PER3P56645 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PER3P56645 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PER3P56645 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms