Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLK3P49761 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CLK3P49761 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 DUX4L16-201ENST00000555130 1264 ntBASIC18.96■□□□□ 0.63
CLK3P49761 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CLK3P49761 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.96■□□□□ 0.63
CLK3P49761 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.96■□□□□ 0.63
CLK3P49761 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLK3P49761 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CLK3P49761 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.96■□□□□ 0.63
CLK3P49761 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CLK3P49761 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CLK3P49761 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.96■□□□□ 0.63
CLK3P49761 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLK3P49761 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.96■□□□□ 0.63
CLK3P49761 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLK3P49761 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLK3P49761 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.95■□□□□ 0.62
CLK3P49761 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.95■□□□□ 0.62
CLK3P49761 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLK3P49761 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.95■□□□□ 0.62
CLK3P49761 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.95■□□□□ 0.62
CLK3P49761 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLK3P49761 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.95■□□□□ 0.62
CLK3P49761 AC091799.1-201ENST00000422823 811 ntBASIC18.95■□□□□ 0.62
CLK3P49761 AC007322.3-201ENST00000426526 701 ntBASIC18.95■□□□□ 0.62
CLK3P49761 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.95■□□□□ 0.62
CLK3P49761 AL162412.1-201ENST00000567129 965 ntBASIC18.95■□□□□ 0.62
CLK3P49761 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.95■□□□□ 0.62
CLK3P49761 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLK3P49761 AC092437.1-201ENST00000624794 1048 ntBASIC18.95■□□□□ 0.62
CLK3P49761 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CLK3P49761 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.95■□□□□ 0.62
CLK3P49761 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.95■□□□□ 0.62
CLK3P49761 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLK3P49761 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLK3P49761 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLK3P49761 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.95■□□□□ 0.62
CLK3P49761 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLK3P49761 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLK3P49761 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.94■□□□□ 0.62
CLK3P49761 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.94■□□□□ 0.62
CLK3P49761 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.94■□□□□ 0.62
CLK3P49761 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.94■□□□□ 0.62
CLK3P49761 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.94■□□□□ 0.62
CLK3P49761 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.94■□□□□ 0.62
CLK3P49761 AC008694.1-202ENST00000636953 945 ntBASIC18.94■□□□□ 0.62
CLK3P49761 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.94■□□□□ 0.62
CLK3P49761 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.94■□□□□ 0.62
CLK3P49761 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLK3P49761 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLK3P49761 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.94■□□□□ 0.62
CLK3P49761 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLK3P49761 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CLK3P49761 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.93■□□□□ 0.62
CLK3P49761 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.93■□□□□ 0.62
CLK3P49761 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.93■□□□□ 0.62
CLK3P49761 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.93■□□□□ 0.62
CLK3P49761 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.93■□□□□ 0.62
CLK3P49761 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.93■□□□□ 0.62
CLK3P49761 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CLK3P49761 AC011484.1-201ENST00000377652 1995 ntBASIC18.93■□□□□ 0.62
CLK3P49761 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLK3P49761 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms