Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 RPS2P52-201ENST00000469610 820 ntBASIC20.17■□□□□ 0.82
CSNK1DP48730 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
CSNK1DP48730 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.17■□□□□ 0.82
CSNK1DP48730 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CSNK1DP48730 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CSNK1DP48730 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 AL512408.1-201ENST00000569378 2000 ntBASIC20.17■□□□□ 0.82
CSNK1DP48730 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.17■□□□□ 0.82
CSNK1DP48730 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1DP48730 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CSNK1DP48730 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1DP48730 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.16■□□□□ 0.82
CSNK1DP48730 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1DP48730 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1DP48730 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.16■□□□□ 0.82
CSNK1DP48730 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1DP48730 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1DP48730 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1DP48730 AC128676.1-201ENST00000454392 318 ntBASIC20.16■□□□□ 0.82
CSNK1DP48730 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.16■□□□□ 0.82
CSNK1DP48730 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.16■□□□□ 0.82
CSNK1DP48730 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1DP48730 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CSNK1DP48730 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1DP48730 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.16■□□□□ 0.82
CSNK1DP48730 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CSNK1DP48730 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.15■□□□□ 0.82
CSNK1DP48730 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.15■□□□□ 0.82
CSNK1DP48730 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1DP48730 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1DP48730 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1DP48730 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CSNK1DP48730 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.15■□□□□ 0.82
CSNK1DP48730 AC069544.1-201ENST00000609399 999 ntBASIC20.15■□□□□ 0.82
CSNK1DP48730 AL121829.2-201ENST00000620908 328 ntBASIC20.15■□□□□ 0.82
CSNK1DP48730 AC073648.6-201ENST00000641589 218 ntBASIC20.15■□□□□ 0.82
CSNK1DP48730 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1DP48730 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1DP48730 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1DP48730 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1DP48730 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1DP48730 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1DP48730 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CSNK1DP48730 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.82
CSNK1DP48730 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CSNK1DP48730 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.14■□□□□ 0.82
CSNK1DP48730 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.14■□□□□ 0.82
CSNK1DP48730 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
CSNK1DP48730 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1DP48730 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CSNK1DP48730 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CSNK1DP48730 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1DP48730 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1DP48730 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.14■□□□□ 0.81
CSNK1DP48730 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1DP48730 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1DP48730 KRT18P29-201ENST00000397031 1267 ntBASIC20.14■□□□□ 0.81
CSNK1DP48730 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.14■□□□□ 0.81
CSNK1DP48730 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CSNK1DP48730 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1DP48730 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.14■□□□□ 0.81
CSNK1DP48730 TMEM191A-211ENST00000637163 1067 ntBASIC20.14■□□□□ 0.81
CSNK1DP48730 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1DP48730 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.14■□□□□ 0.81
CSNK1DP48730 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CSNK1DP48730 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.13■□□□□ 0.81
CSNK1DP48730 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1DP48730 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1DP48730 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CSNK1DP48730 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.13■□□□□ 0.81
CSNK1DP48730 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.13■□□□□ 0.81
CSNK1DP48730 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.13■□□□□ 0.81
CSNK1DP48730 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1DP48730 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CSNK1DP48730 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CSNK1DP48730 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CSNK1DP48730 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CSNK1DP48730 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1DP48730 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1DP48730 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1DP48730 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CSNK1DP48730 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1DP48730 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1DP48730 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CSNK1DP48730 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1DP48730 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1DP48730 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1DP48730 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1DP48730 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.12■□□□□ 0.81
CSNK1DP48730 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1DP48730 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CSNK1DP48730 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms