Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 PAM16YJL104W 450 nt1.71□□□□□ -2.14
VPS41P38959 MAD1YGL086W 2250 nt1.71□□□□□ -2.14
VPS41P38959 DGR2YKL121W 2559 nt1.71□□□□□ -2.14
VPS41P38959 MSH5YDL154W 2706 nt1.71□□□□□ -2.14
VPS41P38959 NIP100YPL174C 2607 nt1.7□□□□□ -2.14
VPS41P38959 Q0032Q0032 291 nt1.7□□□□□ -2.14
VPS41P38959 YEL014CYEL014C 306 nt1.7□□□□□ -2.14
VPS41P38959 tQ(UUG)E2tQ(UUG)E2 72 nt1.7□□□□□ -2.14
VPS41P38959 RRT15YLR162W-A 189 nt1.7□□□□□ -2.14
VPS41P38959 RAD34YDR314C 2079 nt1.7□□□□□ -2.14
VPS41P38959 MON2YNL297C 4911 nt1.7□□□□□ -2.14
VPS41P38959 SXM1YDR395W 2835 nt1.69□□□□□ -2.14
VPS41P38959 HSL1YKL101W 4557 nt1.69□□□□□ -2.14
VPS41P38959 RPL31AYDL075W 342 nt1.69□□□□□ -2.14
VPS41P38959 YDR182W-AYDR182W-A 204 nt1.69□□□□□ -2.14
VPS41P38959 YOR011W-AYOR011W-A 207 nt1.69□□□□□ -2.14
VPS41P38959 YGR109W-BYGR109W-B 4644 nt1.69□□□□□ -2.14
VPS41P38959 SBE22YHR103W 2559 nt1.69□□□□□ -2.14
VPS41P38959 APL2YKL135C 2181 nt1.69□□□□□ -2.14
VPS41P38959 CFT1YDR301W 4074 nt1.69□□□□□ -2.14
VPS41P38959 PIG1YLR273C 1947 nt1.68□□□□□ -2.14
VPS41P38959 HIR3YJR140C 4947 nt1.68□□□□□ -2.14
VPS41P38959 YDL185C-AYDL185C-A 228 nt1.68□□□□□ -2.14
VPS41P38959 YBR182C-AYBR182C-A 195 nt1.68□□□□□ -2.14
VPS41P38959 YLL007CYLL007C 1998 nt1.68□□□□□ -2.14
VPS41P38959 MCM10YIL150C 1716 nt1.68□□□□□ -2.14
VPS41P38959 PET127YOR017W 2403 nt1.68□□□□□ -2.14
VPS41P38959 CTF4YPR135W 2784 nt1.68□□□□□ -2.14
VPS41P38959 SKI3YPR189W 4299 nt1.68□□□□□ -2.14
VPS41P38959 YLR422WYLR422W 5799 nt1.67□□□□□ -2.14
VPS41P38959 snR74snR74 88 nt1.67□□□□□ -2.14
VPS41P38959 OLI1Q0130 231 nt1.67□□□□□ -2.14
VPS41P38959 VPS55YJR044C 423 nt1.67□□□□□ -2.14
VPS41P38959 CHS1YNL192W 3396 nt1.67□□□□□ -2.14
VPS41P38959 CUL3YGR003W 2235 nt1.67□□□□□ -2.14
VPS41P38959 YGL007C-AYGL007C-A 87 nt1.66□□□□□ -2.14
VPS41P38959 RPS25BYLR333C 327 nt1.66□□□□□ -2.14
VPS41P38959 ENV11YGR071C 2583 nt1.65□□□□□ -2.14
VPS41P38959 NOC3YLR002C 1992 nt1.65□□□□□ -2.14
VPS41P38959 YGR151CYGR151C 336 nt1.65□□□□□ -2.15
VPS41P38959 YIR044CYIR044C 186 nt1.65□□□□□ -2.15
VPS41P38959 SPO21YOL091W 1830 nt1.65□□□□□ -2.15
VPS41P38959 YKU70YMR284W 1809 nt1.64□□□□□ -2.15
VPS41P38959 PIK1YNL267W 3201 nt1.64□□□□□ -2.15
VPS41P38959 YJL182CYJL182C 318 nt1.64□□□□□ -2.15
VPS41P38959 PTP2YOR208W 2253 nt1.64□□□□□ -2.15
VPS41P38959 SSK2YNR031C 4740 nt1.64□□□□□ -2.15
VPS41P38959 ATG11YPR049C 3537 nt1.63□□□□□ -2.15
VPS41P38959 YBL008W-AYBL008W-A 240 nt1.63□□□□□ -2.15
VPS41P38959 YLR466C-BYLR466C-B 117 nt1.63□□□□□ -2.15
VPS41P38959 YOR072W-BYOR072W-B 162 nt1.63□□□□□ -2.15
VPS41P38959 SGF11YPL047W 300 nt1.63□□□□□ -2.15
VPS41P38959 FYV8YGR196C 2454 nt1.63□□□□□ -2.15
VPS41P38959 CCH1YGR217W 6120 nt1.63□□□□□ -2.15
VPS41P38959 SFB2YNL049C 2631 nt1.63□□□□□ -2.15
VPS41P38959 YMR175W-AYMR175W-A 195 nt1.62□□□□□ -2.15
VPS41P38959 SPO75YLL005C 2607 nt1.62□□□□□ -2.15
VPS41P38959 KCS1YDR017C 3153 nt1.61□□□□□ -2.15
VPS41P38959 YIR030W-AYIR030W-A 384 nt1.61□□□□□ -2.15
VPS41P38959 YJL120WYJL120W 324 nt1.61□□□□□ -2.15
VPS41P38959 YLR294CYLR294C 330 nt1.61□□□□□ -2.15
VPS41P38959 YOR376WYOR376W 369 nt1.61□□□□□ -2.15
VPS41P38959 PKH2YOL100W 3246 nt1.61□□□□□ -2.15
VPS41P38959 PBY1YBR094W 2262 nt1.61□□□□□ -2.15
VPS41P38959 SLI15YBR156C 2097 nt1.6□□□□□ -2.15
VPS41P38959 SPC110YDR356W 2835 nt1.6□□□□□ -2.15
VPS41P38959 BST1YFL025C 3090 nt1.6□□□□□ -2.15
VPS41P38959 ULI1YFR026C 510 nt1.6□□□□□ -2.15
VPS41P38959 PIP2YOR363C 2991 nt1.59□□□□□ -2.16
VPS41P38959 COG4YPR105C 2586 nt1.58□□□□□ -2.16
VPS41P38959 ECM12YHR021W-A 456 nt1.58□□□□□ -2.16
VPS41P38959 YBR131C-AYBR131C-A 90 nt1.58□□□□□ -2.16
VPS41P38959 RAD50YNL250W 3939 nt1.58□□□□□ -2.16
VPS41P38959 ALK1YGL021W 2283 nt1.57□□□□□ -2.16
VPS41P38959 YGL217CYGL217C 342 nt1.57□□□□□ -2.16
VPS41P38959 COF1YLL050C 432 nt1.57□□□□□ -2.16
VPS41P38959 POL5YEL055C 3069 nt1.57□□□□□ -2.16
VPS41P38959 FIG2YCR089W 4830 nt1.56□□□□□ -2.16
VPS41P38959 YLL019W-AYLL019W-A 93 nt1.56□□□□□ -2.16
VPS41P38959 AHC1YOR023C 1701 nt1.56□□□□□ -2.16
VPS41P38959 SEC21YNL287W 2808 nt1.55□□□□□ -2.16
VPS41P38959 AIM44YPL158C 2277 nt1.55□□□□□ -2.16
VPS41P38959 YJL150WYJL150W 303 nt1.55□□□□□ -2.16
VPS41P38959 YNL338WYNL338W 159 nt1.54□□□□□ -2.16
VPS41P38959 YLR140WYLR140W 327 nt1.53□□□□□ -2.16
VPS41P38959 snR52snR52 92 nt1.53□□□□□ -2.16
VPS41P38959 SMC4YLR086W 4257 nt1.52□□□□□ -2.17
VPS41P38959 SLD3YGL113W 2007 nt1.52□□□□□ -2.17
VPS41P38959 YDR521WYDR521W 336 nt1.52□□□□□ -2.17
VPS41P38959 COA6YMR244C-A 315 nt1.52□□□□□ -2.17
VPS41P38959 YOR345CYOR345C 351 nt1.52□□□□□ -2.17
VPS41P38959 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
VPS41P38959 YLR342W-AYLR342W-A 174 nt1.51□□□□□ -2.17
VPS41P38959 YNL097C-BYNL097C-B 123 nt1.51□□□□□ -2.17
VPS41P38959 FIG4YNL325C 2640 nt1.51□□□□□ -2.17
VPS41P38959 NCA2YPR155C 1851 nt1.5□□□□□ -2.17
VPS41P38959 YLR419WYLR419W 4308 nt1.5□□□□□ -2.17
VPS41P38959 YDL196WYDL196W 330 nt1.5□□□□□ -2.17
VPS41P38959 EMC5YIL027C 426 nt1.5□□□□□ -2.17
VPS41P38959 YBR206WYBR206W 324 nt1.5□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 66.7 ms