Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
KRT9P35527 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT9P35527 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT9P35527 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.92■■□□□ 1.1
KRT9P35527 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.92■■□□□ 1.1
KRT9P35527 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.92■■□□□ 1.1
KRT9P35527 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.92■■□□□ 1.1
KRT9P35527 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
KRT9P35527 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.92■■□□□ 1.1
KRT9P35527 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
KRT9P35527 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT9P35527 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT9P35527 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT9P35527 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
KRT9P35527 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
KRT9P35527 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
KRT9P35527 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
KRT9P35527 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT9P35527 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
KRT9P35527 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
KRT9P35527 AC010536.3-201ENST00000620306 533 ntBASIC21.91■■□□□ 1.1
KRT9P35527 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
KRT9P35527 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT9P35527 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT9P35527 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT9P35527 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT9P35527 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT9P35527 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
KRT9P35527 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT9P35527 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
KRT9P35527 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
KRT9P35527 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
KRT9P35527 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
KRT9P35527 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT9P35527 AC007322.3-201ENST00000426526 701 ntBASIC21.9■■□□□ 1.1
KRT9P35527 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT9P35527 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT9P35527 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT9P35527 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT9P35527 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT9P35527 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
KRT9P35527 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
KRT9P35527 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.89■■□□□ 1.1
KRT9P35527 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KRT9P35527 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KRT9P35527 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
KRT9P35527 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KRT9P35527 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.89■■□□□ 1.09
KRT9P35527 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KRT9P35527 TERF1P5-201ENST00000477545 1207 ntBASIC21.89■■□□□ 1.09
KRT9P35527 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KRT9P35527 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.89■■□□□ 1.09
KRT9P35527 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT9P35527 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
KRT9P35527 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT9P35527 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.89■■□□□ 1.09
KRT9P35527 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KRT9P35527 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT9P35527 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT9P35527 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.88■■□□□ 1.09
KRT9P35527 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT9P35527 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT9P35527 BX119927.1-201ENST00000636596 1552 ntBASIC21.88■■□□□ 1.09
KRT9P35527 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.88■■□□□ 1.09
KRT9P35527 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
KRT9P35527 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.88■■□□□ 1.09
KRT9P35527 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
KRT9P35527 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT9P35527 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.88■■□□□ 1.09
KRT9P35527 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.88■■□□□ 1.09
KRT9P35527 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
KRT9P35527 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT9P35527 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT9P35527 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT9P35527 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KRT9P35527 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
KRT9P35527 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT9P35527 TMEM179-206ENST00000616017 1645 ntBASIC21.88■■□□□ 1.09
KRT9P35527 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.87■■□□□ 1.09
KRT9P35527 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms