Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.94■□□□□ 0.78
BCKDHBP21953 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BCKDHBP21953 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
BCKDHBP21953 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BCKDHBP21953 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
BCKDHBP21953 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
BCKDHBP21953 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.93■□□□□ 0.78
BCKDHBP21953 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.93■□□□□ 0.78
BCKDHBP21953 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.93■□□□□ 0.78
BCKDHBP21953 AC116562.2-201ENST00000507042 360 ntBASIC19.93■□□□□ 0.78
BCKDHBP21953 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.93■□□□□ 0.78
BCKDHBP21953 FITM1-202ENST00000559294 800 ntBASIC19.93■□□□□ 0.78
BCKDHBP21953 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.93■□□□□ 0.78
BCKDHBP21953 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
BCKDHBP21953 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BCKDHBP21953 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.93■□□□□ 0.78
BCKDHBP21953 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.93■□□□□ 0.78
BCKDHBP21953 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.93■□□□□ 0.78
BCKDHBP21953 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
BCKDHBP21953 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.92■□□□□ 0.78
BCKDHBP21953 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
BCKDHBP21953 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BCKDHBP21953 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BCKDHBP21953 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
BCKDHBP21953 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
BCKDHBP21953 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BCKDHBP21953 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.92■□□□□ 0.78
BCKDHBP21953 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.92■□□□□ 0.78
BCKDHBP21953 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.92■□□□□ 0.78
BCKDHBP21953 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.92■□□□□ 0.78
BCKDHBP21953 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.92■□□□□ 0.78
BCKDHBP21953 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.92■□□□□ 0.78
BCKDHBP21953 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.92■□□□□ 0.78
BCKDHBP21953 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.92■□□□□ 0.78
BCKDHBP21953 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.92■□□□□ 0.78
BCKDHBP21953 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.92■□□□□ 0.78
BCKDHBP21953 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
BCKDHBP21953 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
BCKDHBP21953 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.92■□□□□ 0.78
BCKDHBP21953 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
BCKDHBP21953 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.91■□□□□ 0.78
BCKDHBP21953 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.91■□□□□ 0.78
BCKDHBP21953 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.91■□□□□ 0.78
BCKDHBP21953 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
BCKDHBP21953 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 NIFKP9-201ENST00000419265 221 ntBASIC19.91■□□□□ 0.78
BCKDHBP21953 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 AL137013.1-201ENST00000432946 1228 ntBASIC19.91■□□□□ 0.78
BCKDHBP21953 KSR1P1-201ENST00000446298 240 ntBASIC19.91■□□□□ 0.78
BCKDHBP21953 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.91■□□□□ 0.78
BCKDHBP21953 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.91■□□□□ 0.78
BCKDHBP21953 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.91■□□□□ 0.78
BCKDHBP21953 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
BCKDHBP21953 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.91■□□□□ 0.78
BCKDHBP21953 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.91■□□□□ 0.78
BCKDHBP21953 AC073508.3-201ENST00000619697 1419 ntBASIC19.91■□□□□ 0.78
BCKDHBP21953 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.91■□□□□ 0.78
BCKDHBP21953 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
BCKDHBP21953 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.91■□□□□ 0.78
BCKDHBP21953 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
BCKDHBP21953 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
BCKDHBP21953 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
BCKDHBP21953 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.9■□□□□ 0.78
BCKDHBP21953 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.9■□□□□ 0.78
BCKDHBP21953 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.9■□□□□ 0.78
BCKDHBP21953 SLC25A3P1-201ENST00000443844 931 ntBASIC19.9■□□□□ 0.78
BCKDHBP21953 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.9■□□□□ 0.78
BCKDHBP21953 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.9■□□□□ 0.78
BCKDHBP21953 KRT18P22-201ENST00000402024 1347 ntBASIC19.9■□□□□ 0.78
BCKDHBP21953 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BCKDHBP21953 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.89■□□□□ 0.77
BCKDHBP21953 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BCKDHBP21953 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
BCKDHBP21953 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BCKDHBP21953 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
BCKDHBP21953 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BCKDHBP21953 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BCKDHBP21953 KRT16P1-201ENST00000399124 1418 ntBASIC19.89■□□□□ 0.77
BCKDHBP21953 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BCKDHBP21953 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BCKDHBP21953 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.89■□□□□ 0.77
BCKDHBP21953 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.89■□□□□ 0.77
BCKDHBP21953 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms