Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 AC020916.1-201ENST00000587762 1774 ntBASIC14.92□□□□□ -0.02
SMIM17P0DL12 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.92□□□□□ -0.02
SMIM17P0DL12 AC018445.3-201ENST00000624177 1945 ntBASIC14.92□□□□□ -0.02
SMIM17P0DL12 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMIM17P0DL12 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 AC112907.3-201ENST00000577781 2400 ntBASIC14.91□□□□□ -0.02
SMIM17P0DL12 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 AC233992.3-201ENST00000607491 485 ntBASIC14.91□□□□□ -0.02
SMIM17P0DL12 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.91□□□□□ -0.02
SMIM17P0DL12 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMIM17P0DL12 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM17P0DL12 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.9□□□□□ -0.02
SMIM17P0DL12 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SMIM17P0DL12 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM17P0DL12 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM17P0DL12 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM17P0DL12 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM17P0DL12 AL356441.2-201ENST00000443009 864 ntBASIC14.9□□□□□ -0.02
SMIM17P0DL12 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM17P0DL12 MIR4466-201ENST00000606121 54 ntBASIC14.9□□□□□ -0.02
SMIM17P0DL12 AC011484.1-201ENST00000377652 1995 ntBASIC14.9□□□□□ -0.02
SMIM17P0DL12 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM17P0DL12 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SMIM17P0DL12 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM17P0DL12 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMIM17P0DL12 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SMIM17P0DL12 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.9□□□□□ -0.02
SMIM17P0DL12 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 AP004607.4-201ENST00000530158 1459 ntBASIC14.89□□□□□ -0.03
SMIM17P0DL12 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 IGHV3-19-201ENST00000521488 291 ntBASIC14.89□□□□□ -0.03
SMIM17P0DL12 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM17P0DL12 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM17P0DL12 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms