Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
USP1O94782 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP1O94782 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP1O94782 AC016769.1-201ENST00000409132 1010 ntBASIC20.29■□□□□ 0.84
USP1O94782 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP1O94782 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.29■□□□□ 0.84
USP1O94782 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.29■□□□□ 0.84
USP1O94782 MFSD11-216ENST00000590393 1141 ntBASIC20.29■□□□□ 0.84
USP1O94782 AL137784.2-201ENST00000607332 1000 ntBASIC20.29■□□□□ 0.84
USP1O94782 AC016405.3-201ENST00000607710 860 ntBASIC20.29■□□□□ 0.84
USP1O94782 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP1O94782 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP1O94782 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP1O94782 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP1O94782 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
USP1O94782 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP1O94782 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP1O94782 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.28■□□□□ 0.84
USP1O94782 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
USP1O94782 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP1O94782 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.28■□□□□ 0.84
USP1O94782 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.28■□□□□ 0.84
USP1O94782 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP1O94782 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
USP1O94782 AL020996.1-203ENST00000536896 2307 ntBASIC20.28■□□□□ 0.84
USP1O94782 BX119927.1-201ENST00000636596 1552 ntBASIC20.28■□□□□ 0.84
USP1O94782 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.28■□□□□ 0.84
USP1O94782 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.28■□□□□ 0.84
USP1O94782 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.28■□□□□ 0.84
USP1O94782 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
USP1O94782 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP1O94782 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP1O94782 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP1O94782 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
USP1O94782 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP1O94782 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
USP1O94782 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP1O94782 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP1O94782 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.27■□□□□ 0.84
USP1O94782 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP1O94782 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP1O94782 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.27■□□□□ 0.84
USP1O94782 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.27■□□□□ 0.84
USP1O94782 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.27■□□□□ 0.84
USP1O94782 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP1O94782 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP1O94782 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.27■□□□□ 0.84
USP1O94782 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP1O94782 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP1O94782 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.26■□□□□ 0.83
USP1O94782 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.26■□□□□ 0.83
USP1O94782 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
USP1O94782 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USP1O94782 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
USP1O94782 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
USP1O94782 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.26■□□□□ 0.83
USP1O94782 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.26■□□□□ 0.83
USP1O94782 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
USP1O94782 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
USP1O94782 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
USP1O94782 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP1O94782 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.26■□□□□ 0.83
USP1O94782 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP1O94782 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
USP1O94782 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP1O94782 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP1O94782 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP1O94782 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP1O94782 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP1O94782 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP1O94782 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP1O94782 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP1O94782 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.25■□□□□ 0.83
USP1O94782 AC100791.3-201ENST00000617619 330 ntBASIC20.25■□□□□ 0.83
USP1O94782 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP1O94782 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.25■□□□□ 0.83
USP1O94782 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.25■□□□□ 0.83
USP1O94782 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.25■□□□□ 0.83
USP1O94782 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.25■□□□□ 0.83
USP1O94782 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.25■□□□□ 0.83
USP1O94782 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP1O94782 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP1O94782 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
USP1O94782 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.24■□□□□ 0.83
USP1O94782 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP1O94782 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.24■□□□□ 0.83
USP1O94782 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP1O94782 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.24■□□□□ 0.83
USP1O94782 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms