Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.3■□□□□ 0.2
DFFBO76075 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.3■□□□□ 0.2
DFFBO76075 AL031432.3-201ENST00000607698 485 ntBASIC16.3■□□□□ 0.2
DFFBO76075 AL136967.2-201ENST00000623968 743 ntBASIC16.3■□□□□ 0.2
DFFBO76075 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.3■□□□□ 0.2
DFFBO76075 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DFFBO76075 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.3■□□□□ 0.2
DFFBO76075 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DFFBO76075 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.3■□□□□ 0.2
DFFBO76075 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DFFBO76075 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DFFBO76075 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DFFBO76075 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DFFBO76075 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DFFBO76075 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DFFBO76075 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DFFBO76075 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DFFBO76075 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.3■□□□□ 0.2
DFFBO76075 TMEM179-206ENST00000616017 1645 ntBASIC16.3■□□□□ 0.2
DFFBO76075 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.3■□□□□ 0.2
DFFBO76075 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.29■□□□□ 0.2
DFFBO76075 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
DFFBO76075 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.29■□□□□ 0.2
DFFBO76075 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.29■□□□□ 0.2
DFFBO76075 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.29■□□□□ 0.2
DFFBO76075 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.29■□□□□ 0.2
DFFBO76075 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DFFBO76075 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
DFFBO76075 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
DFFBO76075 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DFFBO76075 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.28■□□□□ 0.2
DFFBO76075 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.28■□□□□ 0.2
DFFBO76075 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.28■□□□□ 0.2
DFFBO76075 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
DFFBO76075 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.28■□□□□ 0.2
DFFBO76075 SUDS3P1-201ENST00000505831 966 ntBASIC16.28■□□□□ 0.2
DFFBO76075 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.28■□□□□ 0.2
DFFBO76075 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.28■□□□□ 0.2
DFFBO76075 AC142381.2-201ENST00000566120 298 ntBASIC16.28■□□□□ 0.2
DFFBO76075 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.28■□□□□ 0.2
DFFBO76075 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DFFBO76075 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
DFFBO76075 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DFFBO76075 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.28■□□□□ 0.2
DFFBO76075 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DFFBO76075 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
DFFBO76075 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
DFFBO76075 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DFFBO76075 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DFFBO76075 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.27■□□□□ 0.2
DFFBO76075 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
DFFBO76075 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.27■□□□□ 0.2
DFFBO76075 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.27■□□□□ 0.2
DFFBO76075 SMUG1P1-201ENST00000590640 811 ntBASIC16.27■□□□□ 0.2
DFFBO76075 AC005837.3-201ENST00000612163 286 ntBASIC16.27■□□□□ 0.2
DFFBO76075 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.27■□□□□ 0.2
DFFBO76075 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
DFFBO76075 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
DFFBO76075 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms