Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA12O60330 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA12O60330 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA12O60330 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA12O60330 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA12O60330 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA12O60330 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 AL356652.1-201ENST00000615962 565 ntBASIC19.91■□□□□ 0.78
PCDHGA12O60330 AC113410.3-201ENST00000623366 203 ntBASIC19.91■□□□□ 0.78
PCDHGA12O60330 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA12O60330 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA12O60330 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA12O60330 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA12O60330 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA12O60330 KRT18P21-201ENST00000515767 1272 ntBASIC19.9■□□□□ 0.78
PCDHGA12O60330 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHGA12O60330 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.9■□□□□ 0.78
PCDHGA12O60330 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHGA12O60330 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA12O60330 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA12O60330 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHGA12O60330 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA12O60330 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGA12O60330 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA12O60330 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA12O60330 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PCDHGA12O60330 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGA12O60330 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA12O60330 PRKY-204ENST00000533551 1019 ntBASIC19.89■□□□□ 0.77
PCDHGA12O60330 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGA12O60330 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGA12O60330 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA12O60330 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA12O60330 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA12O60330 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGA12O60330 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 AC087499.1-201ENST00000418141 1075 ntBASIC19.88■□□□□ 0.77
PCDHGA12O60330 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHGA12O60330 AC133561.5-201ENST00000635547 218 ntBASIC19.88■□□□□ 0.77
PCDHGA12O60330 AC097493.4-201ENST00000641197 219 ntBASIC19.88■□□□□ 0.77
PCDHGA12O60330 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA12O60330 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHGA12O60330 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHGA12O60330 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms