Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 AC010525.1-201ENST00000585559 441 ntBASIC14.26□□□□□ -0.13
LINC01549A6NIU2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 AC005082.1-201ENST00000413042 2259 ntBASIC14.26□□□□□ -0.13
LINC01549A6NIU2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC01549A6NIU2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINC01549A6NIU2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 MIR2861-201ENST00000636310 90 ntBASIC14.24□□□□□ -0.13
LINC01549A6NIU2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LINC01549A6NIU2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 AC093484.2-201ENST00000580996 2166 ntBASIC14.23□□□□□ -0.13
LINC01549A6NIU2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC01549A6NIU2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms