Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHISA3A0PJX4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 UNC93B3-201ENST00000308076 687 ntBASIC17.5■□□□□ 0.39
SHISA3A0PJX4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 AC024257.2-201ENST00000549699 147 ntBASIC17.5■□□□□ 0.39
SHISA3A0PJX4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHISA3A0PJX4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 AL138781.2-201ENST00000617896 1843 ntBASIC17.49■□□□□ 0.39
SHISA3A0PJX4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.49■□□□□ 0.39
SHISA3A0PJX4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 AL049812.1-201ENST00000432563 2267 ntBASIC17.48■□□□□ 0.39
SHISA3A0PJX4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 AC008764.7-201ENST00000593779 1081 ntBASIC17.48■□□□□ 0.39
SHISA3A0PJX4 TPRG1LP1-201ENST00000598702 760 ntBASIC17.48■□□□□ 0.39
SHISA3A0PJX4 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SHISA3A0PJX4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 MIR572-201ENST00000384983 95 ntBASIC17.47■□□□□ 0.39
SHISA3A0PJX4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 AC099791.1-201ENST00000416440 715 ntBASIC17.47■□□□□ 0.39
SHISA3A0PJX4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms