Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 TNXA-203ENST00000507684 2038 ntBASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.83■□□□□ 0.6
TRBV5-3A0A0A0MS03 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 AC007322.4-201ENST00000509611 723 ntBASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.82■□□□□ 0.6
TRBV5-3A0A0A0MS03 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 Z82202.1-201ENST00000623446 1880 ntBASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRBV5-3A0A0A0MS03 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 ZNRF2P3-201ENST00000424200 374 ntBASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 KRT8P17-201ENST00000453110 1448 ntBASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-3A0A0A0MS03 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRBV5-3A0A0A0MS03 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-3A0A0A0MS03 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms