Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC187A0A096LP49 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 EP400NL-214ENST00000641289 2402 ntBASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 AC005363.2-201ENST00000618631 242 ntBASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 AC092865.7-201ENST00000641832 219 ntBASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC187A0A096LP49 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC187A0A096LP49 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC187A0A096LP49 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC187A0A096LP49 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC187A0A096LP49 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC187A0A096LP49 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 AL031963.3-201ENST00000606441 850 ntBASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 REXO1L10P-201ENST00000615707 1290 ntBASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC187A0A096LP49 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 AP000525.1-201ENST00000608286 694 ntBASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 AC079598.2-202ENST00000546624 1451 ntBASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC187A0A096LP49 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 KRT18P35-201ENST00000510488 1269 ntBASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 AL049597.2-201ENST00000565575 961 ntBASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 AL590326.2-201ENST00000625139 305 ntBASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC187A0A096LP49 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms