Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC13.44□□□□□ -0.26
TRBV20-1A0A075B6N2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRBV20-1A0A075B6N2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRBV20-1A0A075B6N2 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 RP9P-202ENST00000450133 1212 ntBASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV20-1A0A075B6N2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV20-1A0A075B6N2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms