Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 PTGS1-205ENST00000540753 5375 ntTSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC8.61□□□□□ -1.03
POLR2AP24928 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.61□□□□□ -1.03
POLR2AP24928 PTPN2P1-201ENST00000423212 1072 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 AC097527.1-201ENST00000437031 530 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 AL024493.1-201ENST00000449217 833 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 RN7SKP198-201ENST00000459286 306 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 AP003385.3-201ENST00000472498 287 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC8.61□□□□□ -1.03
POLR2AP24928 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.61□□□□□ -1.03
POLR2AP24928 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC8.61□□□□□ -1.03
POLR2AP24928 AP001542.1-201ENST00000591314 200 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 AC005858.3-201ENST00000624756 589 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
POLR2AP24928 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.61□□□□□ -1.03
POLR2AP24928 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 RNU1-56P-201ENST00000391303 164 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 AL593856.1-201ENST00000419949 805 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 AL034369.1-201ENST00000453808 477 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 PGBD4P1-201ENST00000473644 407 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC8.61□□□□□ -1.03
POLR2AP24928 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.61□□□□□ -1.03
POLR2AP24928 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC8.61□□□□□ -1.03
POLR2AP24928 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC8.61□□□□□ -1.03
POLR2AP24928 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.61□□□□□ -1.03
POLR2AP24928 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC8.61□□□□□ -1.03
POLR2AP24928 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC8.61□□□□□ -1.03
POLR2AP24928 AC211433.3-201ENST00000623770 375 ntBASIC8.61□□□□□ -1.03
POLR2AP24928 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC8.61□□□□□ -1.03
POLR2AP24928 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
POLR2AP24928 CU633906.2-205ENST00000624847 1468 ntTSL 5 BASIC8.6□□□□□ -1.03
POLR2AP24928 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.6□□□□□ -1.03
POLR2AP24928 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.6□□□□□ -1.03
POLR2AP24928 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
POLR2AP24928 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
POLR2AP24928 ADAM28-202ENST00000437154 2085 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
POLR2AP24928 AL033519.1-201ENST00000407266 307 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 VDAC1P10-201ENST00000416715 891 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 AL691447.1-201ENST00000419456 387 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 CDC42P6-201ENST00000421246 576 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 EIF5AP4-201ENST00000441206 465 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 AC245291.3-201ENST00000443400 292 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 AC092601.1-201ENST00000444526 383 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC8.6□□□□□ -1.03
POLR2AP24928 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC8.6□□□□□ -1.03
POLR2AP24928 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.6□□□□□ -1.03
POLR2AP24928 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC8.6□□□□□ -1.03
POLR2AP24928 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC8.6□□□□□ -1.03
POLR2AP24928 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
POLR2AP24928 AC006213.4-201ENST00000616184 634 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC8.6□□□□□ -1.03
POLR2AP24928 AC068213.1-201ENST00000625124 226 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
POLR2AP24928 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC8.6□□□□□ -1.03
POLR2AP24928 AL121936.1-201ENST00000641660 2884 ntBASIC8.6□□□□□ -1.03
POLR2AP24928 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
POLR2AP24928 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms