RNA–Protein interactions for RNA: ENST00000557246.1

AL355103.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355103.1, Length 2,226 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355103.1-201ENST00000557246 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
AL355103.1-201ENST00000557246 CHIC1Q5VXU3 224 aa15.05■□□□□ 0
AL355103.1-201ENST00000557246 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
AL355103.1-201ENST00000557246 PELP1Q8IZL8 1130 aaKnown RBP14.77□□□□□ -0.05
AL355103.1-201ENST00000557246 AEBP2Q6ZN18 517 aaPredicted RBP14.61□□□□□ -0.07
AL355103.1-201ENST00000557246 MYT1Q01538 1121 aa14.45□□□□□ -0.1
AL355103.1-201ENST00000557246 ZCCHC6Q5VYS8 1495 aaKnown RBP14.41□□□□□ -0.1
AL355103.1-201ENST00000557246 HRCP23327 699 aa14.3□□□□□ -0.12
AL355103.1-201ENST00000557246 DCAF1Q9Y4B6 1507 aa14.21□□□□□ -0.14
AL355103.1-201ENST00000557246 DCAF8L2P0C7V8 631 aa14.15□□□□□ -0.14
AL355103.1-201ENST00000557246 ABCC9O60706 1549 aa14.08□□□□□ -0.16
AL355103.1-201ENST00000557246 MYO15BQ96JP2 1530 aa14.03□□□□□ -0.16
AL355103.1-201ENST00000557246 SHROOM4Q9ULL8 1493 aa13.97□□□□□ -0.17
AL355103.1-201ENST00000557246 NACADO15069 1562 aa13.93□□□□□ -0.18
AL355103.1-201ENST00000557246 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
AL355103.1-201ENST00000557246 TTBK1Q5TCY1 1321 aaPredicted RBP13.76□□□□□ -0.21
AL355103.1-201ENST00000557246 PPARGC1BQ86YN6 1023 aaKnown RBP13.75□□□□□ -0.21
AL355103.1-201ENST00000557246 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
AL355103.1-201ENST00000557246 SCRIBQ14160 1630 aa13.71□□□□□ -0.21
AL355103.1-201ENST00000557246 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
AL355103.1-201ENST00000557246 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
AL355103.1-201ENST00000557246 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
AL355103.1-201ENST00000557246 UNC13AQ9UPW8 1703 aa13.48□□□□□ -0.25
AL355103.1-201ENST00000557246 ZEB1P37275 1124 aaPredicted RBP13.4□□□□□ -0.26
AL355103.1-201ENST00000557246 BICRAQ9NZM4 1560 aa13.36□□□□□ -0.27
AL355103.1-201ENST00000557246 RSF1Q96T23 1441 aaPredicted RBP13.32□□□□□ -0.28
AL355103.1-201ENST00000557246 ACIN1Q9UKV3 1341 aaKnown RBP13.32□□□□□ -0.28
AL355103.1-201ENST00000557246 CECR2Q9BXF3 1484 aa13.31□□□□□ -0.28
AL355103.1-201ENST00000557246 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.28
AL355103.1-201ENST00000557246 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
AL355103.1-201ENST00000557246 MROH2BQ7Z745 1585 aa13.24□□□□□ -0.29
AL355103.1-201ENST00000557246 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
AL355103.1-201ENST00000557246 TRIM26Q12899 539 aaPredicted RBP13.21□□□□□ -0.29
AL355103.1-201ENST00000557246 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
AL355103.1-201ENST00000557246 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
AL355103.1-201ENST00000557246 NEUROD1Q13562 356 aa13.15□□□□□ -0.3
AL355103.1-201ENST00000557246 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
AL355103.1-201ENST00000557246 BCL11AQ9H165 835 aa13.13□□□□□ -0.31
AL355103.1-201ENST00000557246 WIZO95785 1651 aa13.13□□□□□ -0.31
AL355103.1-201ENST00000557246 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
AL355103.1-201ENST00000557246 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
AL355103.1-201ENST00000557246 PRKCSHP14314 528 aaPredicted RBP13□□□□□ -0.33
AL355103.1-201ENST00000557246 ATAD2BQ9ULI0 1458 aa12.96□□□□□ -0.34
AL355103.1-201ENST00000557246 SMARCA2P51531 1590 aa12.96□□□□□ -0.34
AL355103.1-201ENST00000557246 FAM9AQ8IZU1 332 aaPredicted RBP12.96□□□□□ -0.34
AL355103.1-201ENST00000557246 EIF4G1Q04637 1599 aaKnown RBP12.95□□□□□ -0.34
AL355103.1-201ENST00000557246 ERICH6Q7L0X2 663 aa12.93□□□□□ -0.34
AL355103.1-201ENST00000557246 CCDC88BA6NC98 1476 aa12.88□□□□□ -0.35
AL355103.1-201ENST00000557246 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
AL355103.1-201ENST00000557246 ANP32EQ9BTT0 268 aa12.87□□□□□ -0.35
AL355103.1-201ENST00000557246 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
AL355103.1-201ENST00000557246 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
AL355103.1-201ENST00000557246 HMGXB3Q12766 1538 aa12.83□□□□□ -0.36
AL355103.1-201ENST00000557246 DIEXFQ68CQ4 756 aaKnown RBP12.78□□□□□ -0.36
AL355103.1-201ENST00000557246 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
AL355103.1-201ENST00000557246 CC2D2AQ9P2K1 1620 aa12.75□□□□□ -0.37
AL355103.1-201ENST00000557246 APLP2Q06481 763 aa12.74□□□□□ -0.37
AL355103.1-201ENST00000557246 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
AL355103.1-201ENST00000557246 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
AL355103.1-201ENST00000557246 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
AL355103.1-201ENST00000557246 PLPPR3Q6T4P5 718 aa12.64□□□□□ -0.39
AL355103.1-201ENST00000557246 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
AL355103.1-201ENST00000557246 ABCC8Q09428 1581 aa12.59□□□□□ -0.39
AL355103.1-201ENST00000557246 KCNA4P22459 653 aa12.58□□□□□ -0.39
AL355103.1-201ENST00000557246 CFTRP13569 1480 aa12.57□□□□□ -0.4
AL355103.1-201ENST00000557246 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
AL355103.1-201ENST00000557246 CADPSQ9ULU8 1353 aa12.53□□□□□ -0.4
AL355103.1-201ENST00000557246 TSHZ2Q9NRE2 1034 aa12.52□□□□□ -0.41
AL355103.1-201ENST00000557246 CCER1Q8TC90 406 aaPredicted RBP12.5□□□□□ -0.41
AL355103.1-201ENST00000557246 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
AL355103.1-201ENST00000557246 YTHDC1Q96MU7 727 aaKnown RBP12.48□□□□□ -0.41
AL355103.1-201ENST00000557246 ZNF316A6NFI3 1004 aaPredicted RBP12.46□□□□□ -0.42
AL355103.1-201ENST00000557246 SYNJ1O43426 1573 aa12.46□□□□□ -0.42
AL355103.1-201ENST00000557246 SUPT16HQ9Y5B9 1047 aaKnown RBP12.44□□□□□ -0.42
AL355103.1-201ENST00000557246 TOP2BQ02880 1626 aa12.43□□□□□ -0.42
AL355103.1-201ENST00000557246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
AL355103.1-201ENST00000557246 BIVM-ERCC5R4GMW8 1640 aa12.41□□□□□ -0.42
AL355103.1-201ENST00000557246 LAMC3Q9Y6N6 1575 aa12.4□□□□□ -0.42
AL355103.1-201ENST00000557246 EEA1Q15075 1411 aa12.4□□□□□ -0.42
AL355103.1-201ENST00000557246 CUX1P39880 1505 aa12.38□□□□□ -0.43
AL355103.1-201ENST00000557246 SOGA1O94964 1423 aa12.38□□□□□ -0.43
AL355103.1-201ENST00000557246 FANCD2Q9BXW9 1451 aa12.37□□□□□ -0.43
AL355103.1-201ENST00000557246 NESP48681 1621 aa12.37□□□□□ -0.43
AL355103.1-201ENST00000557246 MIER1Q8N108 512 aa12.34□□□□□ -0.43
AL355103.1-201ENST00000557246 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
AL355103.1-201ENST00000557246 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
AL355103.1-201ENST00000557246 PDS5BQ9NTI5 1447 aa12.32□□□□□ -0.44
AL355103.1-201ENST00000557246 CEP164Q9UPV0 1460 aa12.29□□□□□ -0.44
AL355103.1-201ENST00000557246 DNMBPQ6XZF7 1577 aa12.27□□□□□ -0.45
AL355103.1-201ENST00000557246 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
AL355103.1-201ENST00000557246 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
AL355103.1-201ENST00000557246 FGD5Q6ZNL6 1462 aa12.24□□□□□ -0.45
AL355103.1-201ENST00000557246 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
AL355103.1-201ENST00000557246 ADRA2BP18089 450 aa12.22□□□□□ -0.45
AL355103.1-201ENST00000557246 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
AL355103.1-201ENST00000557246 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.45
AL355103.1-201ENST00000557246 KIF21BO75037 1637 aa12.21□□□□□ -0.46
AL355103.1-201ENST00000557246 GOLGA3Q08378 1498 aa12.2□□□□□ -0.46
AL355103.1-201ENST00000557246 ERICH6BQ5W0A0 696 aa12.19□□□□□ -0.46
AL355103.1-201ENST00000557246 TNIKQ9UKE5 1360 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms