RNA–Protein interactions for RNA: ENST00000473644.1

PGBD4P1-201, Transcript of piggyBac transposable element derived 4 pseudogene 1, humanhuman

BASIC

Gene PGBD4P1, Length 407 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P1-201ENST00000473644 AEBP2Q6ZN18 517 aaPredicted RBP22.5■■□□□ 1.19
PGBD4P1-201ENST00000473644 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
PGBD4P1-201ENST00000473644 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
PGBD4P1-201ENST00000473644 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
PGBD4P1-201ENST00000473644 FOXD1Q16676 465 aa17.85■□□□□ 0.45
PGBD4P1-201ENST00000473644 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
PGBD4P1-201ENST00000473644 PPP6R1Q9UPN7 881 aa16.79■□□□□ 0.28
PGBD4P1-201ENST00000473644 NISCHQ9Y2I1 1504 aa16.78■□□□□ 0.28
PGBD4P1-201ENST00000473644 ADRA2BP18089 450 aa16.71■□□□□ 0.27
PGBD4P1-201ENST00000473644 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
PGBD4P1-201ENST00000473644 MSH5O43196 834 aa16.62■□□□□ 0.25
PGBD4P1-201ENST00000473644 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
PGBD4P1-201ENST00000473644 ABCC9O60706 1549 aa15.89■□□□□ 0.13
PGBD4P1-201ENST00000473644 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
PGBD4P1-201ENST00000473644 MAPK8IP2Q13387 824 aaPredicted RBP15.35■□□□□ 0.05
PGBD4P1-201ENST00000473644 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
PGBD4P1-201ENST00000473644 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
PGBD4P1-201ENST00000473644 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
PGBD4P1-201ENST00000473644 PPP4R3CPQ6ZMV5 832 aa15□□□□□ -0.01
PGBD4P1-201ENST00000473644 RB1CC1Q8TDY2 1594 aa14.83□□□□□ -0.04
PGBD4P1-201ENST00000473644 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
PGBD4P1-201ENST00000473644 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
PGBD4P1-201ENST00000473644 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
PGBD4P1-201ENST00000473644 HOXD11P31277 338 aaPredicted RBP14.65□□□□□ -0.06
PGBD4P1-201ENST00000473644 KCNA4P22459 653 aa14.64□□□□□ -0.07
PGBD4P1-201ENST00000473644 NACADO15069 1562 aa14.61□□□□□ -0.07
PGBD4P1-201ENST00000473644 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
PGBD4P1-201ENST00000473644 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
PGBD4P1-201ENST00000473644 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
PGBD4P1-201ENST00000473644 BICRAQ9NZM4 1560 aa14.5□□□□□ -0.09
PGBD4P1-201ENST00000473644 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.1
PGBD4P1-201ENST00000473644 CECR2Q9BXF3 1484 aa14.4□□□□□ -0.1
PGBD4P1-201ENST00000473644 DCAF8L2P0C7V8 631 aa14.36□□□□□ -0.11
PGBD4P1-201ENST00000473644 CC2D2AQ9P2K1 1620 aa14.33□□□□□ -0.12
PGBD4P1-201ENST00000473644 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
PGBD4P1-201ENST00000473644 MYO15BQ96JP2 1530 aa14.26□□□□□ -0.13
PGBD4P1-201ENST00000473644 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
PGBD4P1-201ENST00000473644 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
PGBD4P1-201ENST00000473644 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
PGBD4P1-201ENST00000473644 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
PGBD4P1-201ENST00000473644 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
PGBD4P1-201ENST00000473644 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
PGBD4P1-201ENST00000473644 CUX2O14529 1486 aa13.98□□□□□ -0.17
PGBD4P1-201ENST00000473644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
PGBD4P1-201ENST00000473644 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
PGBD4P1-201ENST00000473644 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
PGBD4P1-201ENST00000473644 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
PGBD4P1-201ENST00000473644 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
PGBD4P1-201ENST00000473644 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
PGBD4P1-201ENST00000473644 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
PGBD4P1-201ENST00000473644 U3KPZ7 1027 aaPredicted RBP13.67□□□□□ -0.22
PGBD4P1-201ENST00000473644 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
PGBD4P1-201ENST00000473644 NCAPD3P42695 1498 aa13.56□□□□□ -0.24
PGBD4P1-201ENST00000473644 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
PGBD4P1-201ENST00000473644 NESP48681 1621 aa13.5□□□□□ -0.25
PGBD4P1-201ENST00000473644 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
PGBD4P1-201ENST00000473644 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
PGBD4P1-201ENST00000473644 THOC2Q8NI27 1593 aaKnown RBP13.47□□□□□ -0.25
PGBD4P1-201ENST00000473644 ZBTB22O15209 634 aa13.45□□□□□ -0.26
PGBD4P1-201ENST00000473644 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
PGBD4P1-201ENST00000473644 CAPN15O75808 1086 aa13.4□□□□□ -0.26
PGBD4P1-201ENST00000473644 DSG3P32926 999 aa13.35□□□□□ -0.27
PGBD4P1-201ENST00000473644 HMGXB3Q12766 1538 aa13.34□□□□□ -0.27
PGBD4P1-201ENST00000473644 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
PGBD4P1-201ENST00000473644 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
PGBD4P1-201ENST00000473644 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
PGBD4P1-201ENST00000473644 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
PGBD4P1-201ENST00000473644 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
PGBD4P1-201ENST00000473644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
PGBD4P1-201ENST00000473644 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
PGBD4P1-201ENST00000473644 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
PGBD4P1-201ENST00000473644 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
PGBD4P1-201ENST00000473644 BAZ1AQ9NRL2 1556 aaPredicted RBP13.2□□□□□ -0.3
PGBD4P1-201ENST00000473644 APLP2Q06481 763 aa13.2□□□□□ -0.3
PGBD4P1-201ENST00000473644 BAZ1BQ9UIG0 1483 aaKnown RBP13.18□□□□□ -0.3
PGBD4P1-201ENST00000473644 SMARCA4P51532 1647 aa13.18□□□□□ -0.3
PGBD4P1-201ENST00000473644 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
PGBD4P1-201ENST00000473644 WDR62O43379 1518 aa13.16□□□□□ -0.3
PGBD4P1-201ENST00000473644 MRC2Q9UBG0 1479 aa13.16□□□□□ -0.3
PGBD4P1-201ENST00000473644 ZNF219Q9P2Y4 722 aaPredicted RBP13.15□□□□□ -0.3
PGBD4P1-201ENST00000473644 ABCB7O75027 752 aa13.12□□□□□ -0.31
PGBD4P1-201ENST00000473644 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
PGBD4P1-201ENST00000473644 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
PGBD4P1-201ENST00000473644 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
PGBD4P1-201ENST00000473644 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
PGBD4P1-201ENST00000473644 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
PGBD4P1-201ENST00000473644 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
PGBD4P1-201ENST00000473644 ARHGEF11O15085 1522 aa13.02□□□□□ -0.33
PGBD4P1-201ENST00000473644 CYB5RLQ6IPT4 315 aa12.97□□□□□ -0.33
PGBD4P1-201ENST00000473644 CEP164Q9UPV0 1460 aa12.96□□□□□ -0.34
PGBD4P1-201ENST00000473644 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
PGBD4P1-201ENST00000473644 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
PGBD4P1-201ENST00000473644 POLA2Q14181 598 aa12.9□□□□□ -0.34
PGBD4P1-201ENST00000473644 ATF5Q9Y2D1 282 aaPredicted RBP12.9□□□□□ -0.34
PGBD4P1-201ENST00000473644 URB2Q14146 1524 aaKnown RBP12.87□□□□□ -0.35
PGBD4P1-201ENST00000473644 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
PGBD4P1-201ENST00000473644 CFTRP13569 1480 aa12.82□□□□□ -0.36
PGBD4P1-201ENST00000473644 ZNF608Q9ULD9 1512 aaPredicted RBP12.81□□□□□ -0.36
PGBD4P1-201ENST00000473644 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
PGBD4P1-201ENST00000473644 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms