RNA–Protein interactions for RNA: ENST00000421246.1

CDC42P6-201, Transcript of cell division cycle 42 pseudogene 6, humanhuman

BASIC

Gene CDC42P6, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P6-201ENST00000421246 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.89
CDC42P6-201ENST00000421246 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
CDC42P6-201ENST00000421246 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
CDC42P6-201ENST00000421246 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
CDC42P6-201ENST00000421246 NISCHQ9Y2I1 1504 aa16.82■□□□□ 0.28
CDC42P6-201ENST00000421246 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
CDC42P6-201ENST00000421246 FOXD1Q16676 465 aa16.15■□□□□ 0.18
CDC42P6-201ENST00000421246 PPP6R1Q9UPN7 881 aa15.69■□□□□ 0.1
CDC42P6-201ENST00000421246 ADRA2BP18089 450 aa15.67■□□□□ 0.1
CDC42P6-201ENST00000421246 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
CDC42P6-201ENST00000421246 CCDC180Q9P1Z9 1646 aa15.09■□□□□ 0.01
CDC42P6-201ENST00000421246 ABCC9O60706 1549 aa14.87□□□□□ -0.03
CDC42P6-201ENST00000421246 MSH5O43196 834 aa14.74□□□□□ -0.05
CDC42P6-201ENST00000421246 PPP4R3CPQ6ZMV5 832 aa14.51□□□□□ -0.09
CDC42P6-201ENST00000421246 KCNA4P22459 653 aa14.38□□□□□ -0.11
CDC42P6-201ENST00000421246 RB1CC1Q8TDY2 1594 aa14.25□□□□□ -0.13
CDC42P6-201ENST00000421246 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
CDC42P6-201ENST00000421246 MAPK8IP2Q13387 824 aaPredicted RBP14.2□□□□□ -0.14
CDC42P6-201ENST00000421246 NACADO15069 1562 aa14.18□□□□□ -0.14
CDC42P6-201ENST00000421246 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
CDC42P6-201ENST00000421246 MYO15BQ96JP2 1530 aa14.06□□□□□ -0.16
CDC42P6-201ENST00000421246 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
CDC42P6-201ENST00000421246 DCAF8L2P0C7V8 631 aa14.01□□□□□ -0.17
CDC42P6-201ENST00000421246 ZCCHC6Q5VYS8 1495 aaKnown RBP13.99□□□□□ -0.17
CDC42P6-201ENST00000421246 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
CDC42P6-201ENST00000421246 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
CDC42P6-201ENST00000421246 DCAF1Q9Y4B6 1507 aa13.93□□□□□ -0.18
CDC42P6-201ENST00000421246 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
CDC42P6-201ENST00000421246 BICRAQ9NZM4 1560 aa13.85□□□□□ -0.19
CDC42P6-201ENST00000421246 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
CDC42P6-201ENST00000421246 DNAJC5BQ9UF47 199 aa13.79□□□□□ -0.2
CDC42P6-201ENST00000421246 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
CDC42P6-201ENST00000421246 SCRIBQ14160 1630 aa13.72□□□□□ -0.21
CDC42P6-201ENST00000421246 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
CDC42P6-201ENST00000421246 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
CDC42P6-201ENST00000421246 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
CDC42P6-201ENST00000421246 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
CDC42P6-201ENST00000421246 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
CDC42P6-201ENST00000421246 CC2D2AQ9P2K1 1620 aa13.46□□□□□ -0.25
CDC42P6-201ENST00000421246 CECR2Q9BXF3 1484 aa13.38□□□□□ -0.27
CDC42P6-201ENST00000421246 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
CDC42P6-201ENST00000421246 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
CDC42P6-201ENST00000421246 ZBTB22O15209 634 aa13.26□□□□□ -0.29
CDC42P6-201ENST00000421246 POTEDQ86YR6 584 aa13.26□□□□□ -0.29
CDC42P6-201ENST00000421246 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
CDC42P6-201ENST00000421246 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
CDC42P6-201ENST00000421246 SMARCA4P51532 1647 aa13.11□□□□□ -0.31
CDC42P6-201ENST00000421246 NCAPD3P42695 1498 aa13.08□□□□□ -0.32
CDC42P6-201ENST00000421246 ATAD2BQ9ULI0 1458 aa13.06□□□□□ -0.32
CDC42P6-201ENST00000421246 BAZ1AQ9NRL2 1556 aaPredicted RBP13.05□□□□□ -0.32
CDC42P6-201ENST00000421246 SMARCA2P51531 1590 aa13.04□□□□□ -0.32
CDC42P6-201ENST00000421246 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
CDC42P6-201ENST00000421246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDC42P6-201ENST00000421246 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
CDC42P6-201ENST00000421246 MROH2BQ7Z745 1585 aa12.96□□□□□ -0.33
CDC42P6-201ENST00000421246 BAZ1BQ9UIG0 1483 aaKnown RBP12.94□□□□□ -0.34
CDC42P6-201ENST00000421246 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
CDC42P6-201ENST00000421246 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
CDC42P6-201ENST00000421246 NESP48681 1621 aa12.82□□□□□ -0.36
CDC42P6-201ENST00000421246 WIZO95785 1651 aa12.82□□□□□ -0.36
CDC42P6-201ENST00000421246 ERCC6Q03468 1493 aa12.81□□□□□ -0.36
CDC42P6-201ENST00000421246 LAMC3Q9Y6N6 1575 aa12.79□□□□□ -0.36
CDC42P6-201ENST00000421246 CUX2O14529 1486 aa12.78□□□□□ -0.36
CDC42P6-201ENST00000421246 RSF1Q96T23 1441 aaPredicted RBP12.73□□□□□ -0.37
CDC42P6-201ENST00000421246 THOC2Q8NI27 1593 aaKnown RBP12.72□□□□□ -0.37
CDC42P6-201ENST00000421246 KIF21AQ7Z4S6 1674 aa12.71□□□□□ -0.37
CDC42P6-201ENST00000421246 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
CDC42P6-201ENST00000421246 TOP2AP11388 1531 aaKnown RBP12.67□□□□□ -0.38
CDC42P6-201ENST00000421246 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
CDC42P6-201ENST00000421246 PDS5BQ9NTI5 1447 aa12.66□□□□□ -0.38
CDC42P6-201ENST00000421246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
CDC42P6-201ENST00000421246 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
CDC42P6-201ENST00000421246 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
CDC42P6-201ENST00000421246 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
CDC42P6-201ENST00000421246 ATF5Q9Y2D1 282 aaPredicted RBP12.61□□□□□ -0.39
CDC42P6-201ENST00000421246 CFTRP13569 1480 aa12.58□□□□□ -0.4
CDC42P6-201ENST00000421246 MRC2Q9UBG0 1479 aa12.57□□□□□ -0.4
CDC42P6-201ENST00000421246 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
CDC42P6-201ENST00000421246 WDR62O43379 1518 aa12.55□□□□□ -0.4
CDC42P6-201ENST00000421246 PRDM2Q13029 1718 aa12.54□□□□□ -0.4
CDC42P6-201ENST00000421246 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
CDC42P6-201ENST00000421246 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
CDC42P6-201ENST00000421246 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
CDC42P6-201ENST00000421246 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
CDC42P6-201ENST00000421246 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
CDC42P6-201ENST00000421246 URB2Q14146 1524 aaKnown RBP12.44□□□□□ -0.42
CDC42P6-201ENST00000421246 APLP2Q06481 763 aa12.44□□□□□ -0.42
CDC42P6-201ENST00000421246 CAPN15O75808 1086 aa12.38□□□□□ -0.43
CDC42P6-201ENST00000421246 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
CDC42P6-201ENST00000421246 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
CDC42P6-201ENST00000421246 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
CDC42P6-201ENST00000421246 DNMBPQ6XZF7 1577 aa12.31□□□□□ -0.44
CDC42P6-201ENST00000421246 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
CDC42P6-201ENST00000421246 IFT140Q96RY7 1462 aa12.28□□□□□ -0.44
CDC42P6-201ENST00000421246 CACNB1Q02641 598 aaPredicted RBP12.27□□□□□ -0.45
CDC42P6-201ENST00000421246 ZNF608Q9ULD9 1512 aaPredicted RBP12.25□□□□□ -0.45
CDC42P6-201ENST00000421246 TARBP1Q13395 1621 aaKnown RBP12.24□□□□□ -0.45
CDC42P6-201ENST00000421246 EIF4G3O43432 1585 aaKnown RBP12.23□□□□□ -0.45
CDC42P6-201ENST00000421246 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.45
CDC42P6-201ENST00000421246 POLA2Q14181 598 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms