RNA–Protein interactions for RNA: ENST00000372042.5

CHRDL1-201, Transcript of chordin like 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CHRDL1, Length 1,934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1-201ENST00000372042 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
CHRDL1-201ENST00000372042 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
CHRDL1-201ENST00000372042 MYT1Q01538 1121 aa15.92■□□□□ 0.14
CHRDL1-201ENST00000372042 TTBK1Q5TCY1 1321 aaPredicted RBP15.74■□□□□ 0.11
CHRDL1-201ENST00000372042 PELP1Q8IZL8 1130 aaKnown RBP15.66■□□□□ 0.1
CHRDL1-201ENST00000372042 DAXXQ9UER7 740 aaPredicted RBP15.47■□□□□ 0.07
CHRDL1-201ENST00000372042 ABCC9O60706 1549 aa15.27■□□□□ 0.04
CHRDL1-201ENST00000372042 APLP2Q06481 763 aa15.19■□□□□ 0.02
CHRDL1-201ENST00000372042 ERICH6Q7L0X2 663 aa15.18■□□□□ 0.02
CHRDL1-201ENST00000372042 CCDC180Q9P1Z9 1646 aa15.17■□□□□ 0.02
CHRDL1-201ENST00000372042 PRKCSHP14314 528 aaPredicted RBP15.12■□□□□ 0.01
CHRDL1-201ENST00000372042 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
CHRDL1-201ENST00000372042 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
CHRDL1-201ENST00000372042 RTN4Q9NQC3 1192 aaKnown RBP14.56□□□□□ -0.08
CHRDL1-201ENST00000372042 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
CHRDL1-201ENST00000372042 RB1CC1Q8TDY2 1594 aa14.5□□□□□ -0.09
CHRDL1-201ENST00000372042 ARXQ96QS3 562 aa14.45□□□□□ -0.1
CHRDL1-201ENST00000372042 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
CHRDL1-201ENST00000372042 NACADO15069 1562 aa14.36□□□□□ -0.11
CHRDL1-201ENST00000372042 AMER1Q5JTC6 1135 aaPredicted RBP14.31□□□□□ -0.12
CHRDL1-201ENST00000372042 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
CHRDL1-201ENST00000372042 EIF5BO60841 1220 aaKnown RBP14.26□□□□□ -0.13
CHRDL1-201ENST00000372042 RANGAP1P46060 587 aaPredicted RBP14.23□□□□□ -0.13
CHRDL1-201ENST00000372042 PABPN1Q86U42 306 aaKnown RBP eCLIP14.2□□□□□ -0.14
CHRDL1-201ENST00000372042 CHIC1Q5VXU3 224 aa14.17□□□□□ -0.14
CHRDL1-201ENST00000372042 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
CHRDL1-201ENST00000372042 UNC13AQ9UPW8 1703 aa14.12□□□□□ -0.15
CHRDL1-201ENST00000372042 TIMELESSQ9UNS1 1208 aa14.08□□□□□ -0.16
CHRDL1-201ENST00000372042 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
CHRDL1-201ENST00000372042 ZCCHC6Q5VYS8 1495 aaKnown RBP13.95□□□□□ -0.18
CHRDL1-201ENST00000372042 HOMEZQ8IX15 550 aa13.94□□□□□ -0.18
CHRDL1-201ENST00000372042 DCAF1Q9Y4B6 1507 aa13.92□□□□□ -0.18
CHRDL1-201ENST00000372042 BCL11AQ9H165 835 aa13.88□□□□□ -0.19
CHRDL1-201ENST00000372042 SHROOM4Q9ULL8 1493 aa13.88□□□□□ -0.19
CHRDL1-201ENST00000372042 TULP1O00294 542 aaPredicted RBP13.84□□□□□ -0.19
CHRDL1-201ENST00000372042 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
CHRDL1-201ENST00000372042 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
CHRDL1-201ENST00000372042 KCNA4P22459 653 aa13.82□□□□□ -0.2
CHRDL1-201ENST00000372042 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
CHRDL1-201ENST00000372042 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
CHRDL1-201ENST00000372042 EIF4G1Q04637 1599 aaKnown RBP13.73□□□□□ -0.21
CHRDL1-201ENST00000372042 TAOK2Q9UL54 1235 aa13.72□□□□□ -0.21
CHRDL1-201ENST00000372042 PODXL2Q9NZ53 605 aa13.66□□□□□ -0.22
CHRDL1-201ENST00000372042 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
CHRDL1-201ENST00000372042 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
CHRDL1-201ENST00000372042 AEBP2Q6ZN18 517 aaPredicted RBP13.57□□□□□ -0.24
CHRDL1-201ENST00000372042 FAM9AQ8IZU1 332 aaPredicted RBP13.54□□□□□ -0.24
CHRDL1-201ENST00000372042 BCANQ96GW7 911 aa13.53□□□□□ -0.24
CHRDL1-201ENST00000372042 TPRNQ4KMQ1 711 aa13.46□□□□□ -0.25
CHRDL1-201ENST00000372042 NPM2Q86SE8 214 aaKnown RBP13.42□□□□□ -0.26
CHRDL1-201ENST00000372042 GTF3C3Q9Y5Q9 886 aa13.39□□□□□ -0.27
CHRDL1-201ENST00000372042 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
CHRDL1-201ENST00000372042 FBXO3Q9UK99 471 aa13.27□□□□□ -0.28
CHRDL1-201ENST00000372042 UBE2Q2Q8WVN8 375 aa13.27□□□□□ -0.29
CHRDL1-201ENST00000372042 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
CHRDL1-201ENST00000372042 C14orf37Q86TY3 774 aa13.24□□□□□ -0.29
CHRDL1-201ENST00000372042 ERCC6Q03468 1493 aa13.21□□□□□ -0.29
CHRDL1-201ENST00000372042 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.29
CHRDL1-201ENST00000372042 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.3
CHRDL1-201ENST00000372042 CUX2O14529 1486 aa13.2□□□□□ -0.3
CHRDL1-201ENST00000372042 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
CHRDL1-201ENST00000372042 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
CHRDL1-201ENST00000372042 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
CHRDL1-201ENST00000372042 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
CHRDL1-201ENST00000372042 BAZ1AQ9NRL2 1556 aaPredicted RBP13.1□□□□□ -0.31
CHRDL1-201ENST00000372042 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
CHRDL1-201ENST00000372042 NESP48681 1621 aa13.08□□□□□ -0.32
CHRDL1-201ENST00000372042 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
CHRDL1-201ENST00000372042 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
CHRDL1-201ENST00000372042 NEFLP07196 543 aa13.01□□□□□ -0.33
CHRDL1-201ENST00000372042 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
CHRDL1-201ENST00000372042 PDE4CQ08493 712 aa13□□□□□ -0.33
CHRDL1-201ENST00000372042 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
CHRDL1-201ENST00000372042 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
CHRDL1-201ENST00000372042 LOC105371045A0A1W2PR82 267 aa12.98□□□□□ -0.33
CHRDL1-201ENST00000372042 HRCP23327 699 aa12.98□□□□□ -0.33
CHRDL1-201ENST00000372042 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
CHRDL1-201ENST00000372042 CENPBP07199 599 aaPredicted RBP12.96□□□□□ -0.33
CHRDL1-201ENST00000372042 TRIM26Q12899 539 aaPredicted RBP12.96□□□□□ -0.34
CHRDL1-201ENST00000372042 PKNOX2Q96KN3 472 aa12.94□□□□□ -0.34
CHRDL1-201ENST00000372042 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
CHRDL1-201ENST00000372042 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
CHRDL1-201ENST00000372042 KIF21AQ7Z4S6 1674 aa12.9□□□□□ -0.34
CHRDL1-201ENST00000372042 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
CHRDL1-201ENST00000372042 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
CHRDL1-201ENST00000372042 CADPSQ9ULU8 1353 aa12.85□□□□□ -0.35
CHRDL1-201ENST00000372042 BRD2P25440 801 aaKnown RBP12.84□□□□□ -0.35
CHRDL1-201ENST00000372042 CNKSR2Q8WXI2 1034 aa12.82□□□□□ -0.36
CHRDL1-201ENST00000372042 WIZO95785 1651 aa12.82□□□□□ -0.36
CHRDL1-201ENST00000372042 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
CHRDL1-201ENST00000372042 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
CHRDL1-201ENST00000372042 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
CHRDL1-201ENST00000372042 WDR62O43379 1518 aa12.78□□□□□ -0.36
CHRDL1-201ENST00000372042 SCAF1Q9H7N4 1312 aaKnown RBP12.76□□□□□ -0.37
CHRDL1-201ENST00000372042 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
CHRDL1-201ENST00000372042 PHF23Q9BUL5 403 aaPredicted RBP12.73□□□□□ -0.37
CHRDL1-201ENST00000372042 SLC4A1APQ9BWU0 796 aaKnown RBP12.73□□□□□ -0.37
CHRDL1-201ENST00000372042 SUPT5HO00267 1087 aaKnown RBP12.72□□□□□ -0.37
CHRDL1-201ENST00000372042 VSIG10Q8N0Z9 540 aa12.72□□□□□ -0.37
CHRDL1-201ENST00000372042 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms