RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 DCAF8L2P0C7V8 631 aa16.58■□□□□ 0.24
SRGAP2B-204ENST00000612199 NISCHQ9Y2I1 1504 aa15.97■□□□□ 0.15
SRGAP2B-204ENST00000612199 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
SRGAP2B-204ENST00000612199 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
SRGAP2B-204ENST00000612199 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
SRGAP2B-204ENST00000612199 MYT1Q01538 1121 aa15.03■□□□□ -0
SRGAP2B-204ENST00000612199 PELP1Q8IZL8 1130 aaKnown RBP14.95□□□□□ -0.02
SRGAP2B-204ENST00000612199 FAM9AQ8IZU1 332 aaPredicted RBP14.86□□□□□ -0.03
SRGAP2B-204ENST00000612199 ERICH6Q7L0X2 663 aa14.77□□□□□ -0.04
SRGAP2B-204ENST00000612199 TTBK1Q5TCY1 1321 aaPredicted RBP14.72□□□□□ -0.05
SRGAP2B-204ENST00000612199 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
SRGAP2B-204ENST00000612199 APLP2Q06481 763 aa14.62□□□□□ -0.07
SRGAP2B-204ENST00000612199 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
SRGAP2B-204ENST00000612199 RANGAP1P46060 587 aaPredicted RBP14.58□□□□□ -0.07
SRGAP2B-204ENST00000612199 MYT1LQ9UL68 1186 aa14.55□□□□□ -0.08
SRGAP2B-204ENST00000612199 ATP1B4Q9UN42 357 aaPredicted RBP14.5□□□□□ -0.09
SRGAP2B-204ENST00000612199 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
SRGAP2B-204ENST00000612199 UBTFP17480 764 aaKnown RBP14.3□□□□□ -0.12
SRGAP2B-204ENST00000612199 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
SRGAP2B-204ENST00000612199 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
SRGAP2B-204ENST00000612199 ZEB1P37275 1124 aaPredicted RBP14.25□□□□□ -0.13
SRGAP2B-204ENST00000612199 CCER1Q8TC90 406 aaPredicted RBP14.22□□□□□ -0.13
SRGAP2B-204ENST00000612199 SLC24A1O60721 1099 aa14.14□□□□□ -0.15
SRGAP2B-204ENST00000612199 CENPBP07199 599 aaPredicted RBP14.1□□□□□ -0.15
SRGAP2B-204ENST00000612199 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
SRGAP2B-204ENST00000612199 POLR3GLQ9BT43 218 aa14.08□□□□□ -0.16
SRGAP2B-204ENST00000612199 LOC105371045A0A1W2PR82 267 aa14.06□□□□□ -0.16
SRGAP2B-204ENST00000612199 BCL11AQ9H165 835 aa14.03□□□□□ -0.16
SRGAP2B-204ENST00000612199 DAXXQ9UER7 740 aaPredicted RBP14.03□□□□□ -0.16
SRGAP2B-204ENST00000612199 YTHDC1Q96MU7 727 aaKnown RBP13.92□□□□□ -0.18
SRGAP2B-204ENST00000612199 ITGAEP38570 1179 aa13.91□□□□□ -0.18
SRGAP2B-204ENST00000612199 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
SRGAP2B-204ENST00000612199 TRIM26Q12899 539 aaPredicted RBP13.88□□□□□ -0.19
SRGAP2B-204ENST00000612199 ABCC9O60706 1549 aa13.86□□□□□ -0.19
SRGAP2B-204ENST00000612199 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
SRGAP2B-204ENST00000612199 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
SRGAP2B-204ENST00000612199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
SRGAP2B-204ENST00000612199 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
SRGAP2B-204ENST00000612199 HRCP23327 699 aa13.75□□□□□ -0.21
SRGAP2B-204ENST00000612199 BCANQ96GW7 911 aa13.74□□□□□ -0.21
SRGAP2B-204ENST00000612199 A0A0G2JS52 829 aa13.73□□□□□ -0.21
SRGAP2B-204ENST00000612199 NEFLP07196 543 aa13.73□□□□□ -0.21
SRGAP2B-204ENST00000612199 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
SRGAP2B-204ENST00000612199 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
SRGAP2B-204ENST00000612199 ZNF316A6NFI3 1004 aaPredicted RBP13.56□□□□□ -0.24
SRGAP2B-204ENST00000612199 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
SRGAP2B-204ENST00000612199 FAM50AQ14320 339 aaKnown RBP13.49□□□□□ -0.25
SRGAP2B-204ENST00000612199 ZBTB47Q9UFB7 747 aaPredicted RBP13.48□□□□□ -0.25
SRGAP2B-204ENST00000612199 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
SRGAP2B-204ENST00000612199 FBLN2P98095 1184 aa13.39□□□□□ -0.27
SRGAP2B-204ENST00000612199 NEUROD1Q13562 356 aa13.38□□□□□ -0.27
SRGAP2B-204ENST00000612199 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
SRGAP2B-204ENST00000612199 CDK11AQ9UQ88 783 aaPredicted RBP13.38□□□□□ -0.27
SRGAP2B-204ENST00000612199 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
SRGAP2B-204ENST00000612199 SENP3Q9H4L4 574 aaPredicted RBP13.37□□□□□ -0.27
SRGAP2B-204ENST00000612199 TRIM52Q96A61 297 aa13.36□□□□□ -0.27
SRGAP2B-204ENST00000612199 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
SRGAP2B-204ENST00000612199 ARID3CA6NKF2 412 aa13.34□□□□□ -0.27
SRGAP2B-204ENST00000612199 KRI1Q8N9T8 703 aaKnown RBP13.32□□□□□ -0.28
SRGAP2B-204ENST00000612199 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
SRGAP2B-204ENST00000612199 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
SRGAP2B-204ENST00000612199 ZNF326Q5BKZ1 582 aaKnown RBP13.26□□□□□ -0.29
SRGAP2B-204ENST00000612199 PRM3Q9NNZ6 103 aa13.24□□□□□ -0.29
SRGAP2B-204ENST00000612199 ZCCHC6Q5VYS8 1495 aaKnown RBP13.2□□□□□ -0.3
SRGAP2B-204ENST00000612199 RTL5Q5HYW3 569 aaPredicted RBP13.17□□□□□ -0.3
SRGAP2B-204ENST00000612199 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
SRGAP2B-204ENST00000612199 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2B-204ENST00000612199 ESF1Q9H501 851 aaKnown RBP13.11□□□□□ -0.31
SRGAP2B-204ENST00000612199 ARXQ96QS3 562 aa13.09□□□□□ -0.31
SRGAP2B-204ENST00000612199 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
SRGAP2B-204ENST00000612199 CLSTN1O94985 981 aa13.07□□□□□ -0.32
SRGAP2B-204ENST00000612199 GTF3C3Q9Y5Q9 886 aa13.06□□□□□ -0.32
SRGAP2B-204ENST00000612199 ANP32CO43423 234 aa13.05□□□□□ -0.32
SRGAP2B-204ENST00000612199 NPHP1O15259 732 aa13.04□□□□□ -0.32
SRGAP2B-204ENST00000612199 NEFMP07197 916 aa13.04□□□□□ -0.32
SRGAP2B-204ENST00000612199 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
SRGAP2B-204ENST00000612199 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
SRGAP2B-204ENST00000612199 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
SRGAP2B-204ENST00000612199 HAP1P54257 671 aaPredicted RBP12.98□□□□□ -0.33
SRGAP2B-204ENST00000612199 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
SRGAP2B-204ENST00000612199 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
SRGAP2B-204ENST00000612199 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
SRGAP2B-204ENST00000612199 CCDC180Q9P1Z9 1646 aa12.94□□□□□ -0.34
SRGAP2B-204ENST00000612199 CHIC2Q9UKJ5 165 aa12.94□□□□□ -0.34
SRGAP2B-204ENST00000612199 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
SRGAP2B-204ENST00000612199 C14orf37Q86TY3 774 aa12.9□□□□□ -0.34
SRGAP2B-204ENST00000612199 ACIN1Q9UKV3 1341 aaKnown RBP12.9□□□□□ -0.35
SRGAP2B-204ENST00000612199 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
SRGAP2B-204ENST00000612199 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
SRGAP2B-204ENST00000612199 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
SRGAP2B-204ENST00000612199 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
SRGAP2B-204ENST00000612199 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
SRGAP2B-204ENST00000612199 TONSLQ96HA7 1378 aa12.84□□□□□ -0.35
SRGAP2B-204ENST00000612199 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
SRGAP2B-204ENST00000612199 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
SRGAP2B-204ENST00000612199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.36
SRGAP2B-204ENST00000612199 HIRIP3Q9BW71 556 aaPredicted RBP12.81□□□□□ -0.36
SRGAP2B-204ENST00000612199 TPRNQ4KMQ1 711 aa12.79□□□□□ -0.36
SRGAP2B-204ENST00000612199 RB1CC1Q8TDY2 1594 aa12.79□□□□□ -0.36
SRGAP2B-204ENST00000612199 CLIP1P30622 1438 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms