Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC9.25□□□□□ -0.93
HMG20BQ9P0W2 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 KYNUP1-201ENST00000466683 1406 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 PWRN1-212ENST00000569908 1435 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 PTMAP8-201ENST00000397729 342 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 RPSAP72-201ENST00000407020 358 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 RN7SKP225-201ENST00000410405 352 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AC004986.1-201ENST00000414855 607 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 GAPDHP55-201ENST00000423136 803 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 FTH1P5-201ENST00000425761 545 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 ATP5LP4-201ENST00000434169 307 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 CR391992.1-201ENST00000438601 394 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 GAPDHP61-201ENST00000507324 1005 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AC233724.10-201ENST00000510454 409 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 RN7SL697P-201ENST00000582484 299 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AL451085.1-201ENST00000604546 690 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AL109936.2-201ENST00000605350 650 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AC139795.3-201ENST00000606358 541 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AL391903.2-201ENST00000614532 247 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 MIAT_exon1.1-201ENST00000617016 135 ntBASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
HMG20BQ9P0W2 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 DDX50P1-201ENST00000438163 2400 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 NACA-216ENST00000550952 2922 ntTSL 2 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 SF3A3P1-201ENST00000446317 1477 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 VEZF1P1-201ENST00000423931 1541 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AC113608.1-201ENST00000398740 305 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 NUS1P4-201ENST00000401550 585 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 RNF11P2-201ENST00000427702 440 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 YWHABP1-201ENST00000445359 727 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AL591379.2-201ENST00000450223 397 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 FTH1P7-201ENST00000450676 552 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AC013787.1-201ENST00000460165 307 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 RN7SL516P-201ENST00000496127 297 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 CARD8-214ENST00000520007 614 ntTSL 2 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 SNX18P27-201ENST00000523611 779 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 COX6CP11-201ENST00000555293 229 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 UBE2CP1-201ENST00000557130 554 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AC044860.3-201ENST00000559957 368 ntBASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
HMG20BQ9P0W2 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms