Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.08□□□□□ -1.12
LMO3Q8TAP4 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 MAPK10-333ENST00000641607 2481 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 CNN3P1-201ENST00000401596 935 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 SS18L2P1-201ENST00000445923 213 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 RN7SL338P-201ENST00000481467 293 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 RN7SL569P-201ENST00000494652 288 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 RN7SL14P-201ENST00000579715 298 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 OR5AH1P-201ENST00000595968 283 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 AL357556.1-201ENST00000421884 1388 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 AL080317.3-201ENST00000607434 4315 ntBASIC8.07□□□□□ -1.12
LMO3Q8TAP4 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
LMO3Q8TAP4 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 RN7SKP63-201ENST00000363187 301 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 PCNAP3-201ENST00000397222 778 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 RN7SKP131-201ENST00000410698 301 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AC009299.1-201ENST00000429684 717 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 LIN28AP2-201ENST00000445283 458 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 RPS29P5-201ENST00000452777 171 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 RN7SL180P-201ENST00000466769 294 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 RN7SL549P-201ENST00000478997 282 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AC008799.2-201ENST00000484429 647 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AC008496.1-201ENST00000509131 295 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AP003385.2-201ENST00000524910 973 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 MIR5192-201ENST00000579892 92 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AC010327.2-201ENST00000587647 488 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AL390058.1-201ENST00000603834 629 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 GAS2-210ENST00000630668 674 ntTSL 5 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AC073488.2-201ENST00000631903 751 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 AC018688.1-201ENST00000636528 1754 ntBASIC8.06□□□□□ -1.12
LMO3Q8TAP4 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LMO3Q8TAP4 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
LMO3Q8TAP4 CASC19-205ENST00000641013 1411 ntBASIC8.05□□□□□ -1.12
LMO3Q8TAP4 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms