RNA–Protein interactions for RNA: ENST00000524910.1

AP003385.2-201, humanhuman

BASIC

Gene AP003385.2, Length 973 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003385.2-201ENST00000524910 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
AP003385.2-201ENST00000524910 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
AP003385.2-201ENST00000524910 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
AP003385.2-201ENST00000524910 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
AP003385.2-201ENST00000524910 FOXD1Q16676 465 aa18.84■□□□□ 0.61
AP003385.2-201ENST00000524910 NISCHQ9Y2I1 1504 aa18.82■□□□□ 0.6
AP003385.2-201ENST00000524910 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
AP003385.2-201ENST00000524910 MSH5O43196 834 aa17.64■□□□□ 0.41
AP003385.2-201ENST00000524910 PIAS4Q8N2W9 510 aaPredicted RBP17.55■□□□□ 0.4
AP003385.2-201ENST00000524910 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
AP003385.2-201ENST00000524910 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
AP003385.2-201ENST00000524910 ADRA2BP18089 450 aa17.46■□□□□ 0.39
AP003385.2-201ENST00000524910 CCDC180Q9P1Z9 1646 aa16.92■□□□□ 0.3
AP003385.2-201ENST00000524910 ABCC9O60706 1549 aa16.47■□□□□ 0.23
AP003385.2-201ENST00000524910 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
AP003385.2-201ENST00000524910 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
AP003385.2-201ENST00000524910 RB1CC1Q8TDY2 1594 aa15.96■□□□□ 0.15
AP003385.2-201ENST00000524910 SCAF1Q9H7N4 1312 aaKnown RBP15.92■□□□□ 0.14
AP003385.2-201ENST00000524910 NACADO15069 1562 aa15.92■□□□□ 0.14
AP003385.2-201ENST00000524910 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
AP003385.2-201ENST00000524910 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
AP003385.2-201ENST00000524910 DCAF8L2P0C7V8 631 aa15.67■□□□□ 0.1
AP003385.2-201ENST00000524910 ZCCHC6Q5VYS8 1495 aaKnown RBP15.66■□□□□ 0.1
AP003385.2-201ENST00000524910 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
AP003385.2-201ENST00000524910 UNC13AQ9UPW8 1703 aa15.5■□□□□ 0.07
AP003385.2-201ENST00000524910 SHROOM4Q9ULL8 1493 aa15.42■□□□□ 0.06
AP003385.2-201ENST00000524910 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
AP003385.2-201ENST00000524910 BICRAQ9NZM4 1560 aa15.33■□□□□ 0.05
AP003385.2-201ENST00000524910 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
AP003385.2-201ENST00000524910 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
AP003385.2-201ENST00000524910 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
AP003385.2-201ENST00000524910 SCRIBQ14160 1630 aa15.27■□□□□ 0.03
AP003385.2-201ENST00000524910 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
AP003385.2-201ENST00000524910 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
AP003385.2-201ENST00000524910 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
AP003385.2-201ENST00000524910 RNF39Q9H2S5 420 aa15.06■□□□□ 0
AP003385.2-201ENST00000524910 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
AP003385.2-201ENST00000524910 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
AP003385.2-201ENST00000524910 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
AP003385.2-201ENST00000524910 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
AP003385.2-201ENST00000524910 C1QBPQ07021 282 aaKnown RBP14.82□□□□□ -0.04
AP003385.2-201ENST00000524910 NPM3O75607 178 aaKnown RBP14.73□□□□□ -0.05
AP003385.2-201ENST00000524910 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
AP003385.2-201ENST00000524910 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
AP003385.2-201ENST00000524910 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
AP003385.2-201ENST00000524910 NCAPD3P42695 1498 aa14.63□□□□□ -0.07
AP003385.2-201ENST00000524910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
AP003385.2-201ENST00000524910 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
AP003385.2-201ENST00000524910 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
AP003385.2-201ENST00000524910 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
AP003385.2-201ENST00000524910 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
AP003385.2-201ENST00000524910 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
AP003385.2-201ENST00000524910 KCNA4P22459 653 aa14.35□□□□□ -0.11
AP003385.2-201ENST00000524910 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
AP003385.2-201ENST00000524910 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
AP003385.2-201ENST00000524910 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
AP003385.2-201ENST00000524910 WIZO95785 1651 aa14.28□□□□□ -0.12
AP003385.2-201ENST00000524910 CUX2O14529 1486 aa14.27□□□□□ -0.12
AP003385.2-201ENST00000524910 RSF1Q96T23 1441 aaPredicted RBP14.24□□□□□ -0.13
AP003385.2-201ENST00000524910 PDS5BQ9NTI5 1447 aa14.22□□□□□ -0.13
AP003385.2-201ENST00000524910 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.13
AP003385.2-201ENST00000524910 NESP48681 1621 aa14.17□□□□□ -0.14
AP003385.2-201ENST00000524910 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
AP003385.2-201ENST00000524910 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
AP003385.2-201ENST00000524910 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
AP003385.2-201ENST00000524910 CAPN15O75808 1086 aa14.11□□□□□ -0.15
AP003385.2-201ENST00000524910 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
AP003385.2-201ENST00000524910 THOC2Q8NI27 1593 aaKnown RBP14.1□□□□□ -0.15
AP003385.2-201ENST00000524910 DSG3P32926 999 aa14.07□□□□□ -0.16
AP003385.2-201ENST00000524910 PRDM2Q13029 1718 aa14.07□□□□□ -0.16
AP003385.2-201ENST00000524910 CFTRP13569 1480 aa14.06□□□□□ -0.16
AP003385.2-201ENST00000524910 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
AP003385.2-201ENST00000524910 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
AP003385.2-201ENST00000524910 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
AP003385.2-201ENST00000524910 WDR62O43379 1518 aa14□□□□□ -0.17
AP003385.2-201ENST00000524910 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
AP003385.2-201ENST00000524910 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
AP003385.2-201ENST00000524910 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
AP003385.2-201ENST00000524910 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
AP003385.2-201ENST00000524910 APLP2Q06481 763 aa13.83□□□□□ -0.2
AP003385.2-201ENST00000524910 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
AP003385.2-201ENST00000524910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
AP003385.2-201ENST00000524910 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
AP003385.2-201ENST00000524910 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
AP003385.2-201ENST00000524910 ABCB7O75027 752 aa13.79□□□□□ -0.2
AP003385.2-201ENST00000524910 DNMBPQ6XZF7 1577 aa13.79□□□□□ -0.2
AP003385.2-201ENST00000524910 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
AP003385.2-201ENST00000524910 TOPBP1Q92547 1522 aa13.75□□□□□ -0.21
AP003385.2-201ENST00000524910 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
AP003385.2-201ENST00000524910 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.21
AP003385.2-201ENST00000524910 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
AP003385.2-201ENST00000524910 POTEHQ6S545 545 aa13.65□□□□□ -0.22
AP003385.2-201ENST00000524910 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
AP003385.2-201ENST00000524910 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
AP003385.2-201ENST00000524910 TARBP1Q13395 1621 aaKnown RBP13.61□□□□□ -0.23
AP003385.2-201ENST00000524910 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
AP003385.2-201ENST00000524910 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
AP003385.2-201ENST00000524910 SOGA1O94964 1423 aa13.57□□□□□ -0.24
AP003385.2-201ENST00000524910 FGD5Q6ZNL6 1462 aa13.57□□□□□ -0.24
AP003385.2-201ENST00000524910 CUX1P39880 1505 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms