RNA–Protein interactions for RNA: ENST00000397222.2

PCNAP3-201, Transcript of proliferating cell nuclear antigen pseudogene 3, humanhuman

BASIC

Gene PCNAP3, Length 778 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP3-201ENST00000397222 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
PCNAP3-201ENST00000397222 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
PCNAP3-201ENST00000397222 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
PCNAP3-201ENST00000397222 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
PCNAP3-201ENST00000397222 FOXD1Q16676 465 aa20.68■□□□□ 0.9
PCNAP3-201ENST00000397222 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
PCNAP3-201ENST00000397222 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
PCNAP3-201ENST00000397222 PPP6R1Q9UPN7 881 aa19.59■□□□□ 0.73
PCNAP3-201ENST00000397222 ADRA2BP18089 450 aa19.51■□□□□ 0.71
PCNAP3-201ENST00000397222 PIAS4Q8N2W9 510 aaPredicted RBP19.35■□□□□ 0.69
PCNAP3-201ENST00000397222 MSH5O43196 834 aa19.15■□□□□ 0.66
PCNAP3-201ENST00000397222 ABCC9O60706 1549 aa18.69■□□□□ 0.58
PCNAP3-201ENST00000397222 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
PCNAP3-201ENST00000397222 POTEDQ86YR6 584 aa18.33■□□□□ 0.52
PCNAP3-201ENST00000397222 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
PCNAP3-201ENST00000397222 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
PCNAP3-201ENST00000397222 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
PCNAP3-201ENST00000397222 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
PCNAP3-201ENST00000397222 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
PCNAP3-201ENST00000397222 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
PCNAP3-201ENST00000397222 NACADO15069 1562 aa17.57■□□□□ 0.4
PCNAP3-201ENST00000397222 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
PCNAP3-201ENST00000397222 PABPN1Q86U42 306 aaKnown RBP eCLIP17.28■□□□□ 0.36
PCNAP3-201ENST00000397222 MYO15BQ96JP2 1530 aa17.27■□□□□ 0.36
PCNAP3-201ENST00000397222 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
PCNAP3-201ENST00000397222 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
PCNAP3-201ENST00000397222 DCAF8L2P0C7V8 631 aa17.19■□□□□ 0.34
PCNAP3-201ENST00000397222 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
PCNAP3-201ENST00000397222 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
PCNAP3-201ENST00000397222 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
PCNAP3-201ENST00000397222 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
PCNAP3-201ENST00000397222 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
PCNAP3-201ENST00000397222 ZCCHC6Q5VYS8 1495 aaKnown RBP16.93■□□□□ 0.3
PCNAP3-201ENST00000397222 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
PCNAP3-201ENST00000397222 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
PCNAP3-201ENST00000397222 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
PCNAP3-201ENST00000397222 NPM3O75607 178 aaKnown RBP16.84■□□□□ 0.29
PCNAP3-201ENST00000397222 EIF4G1Q04637 1599 aaKnown RBP16.83■□□□□ 0.28
PCNAP3-201ENST00000397222 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
PCNAP3-201ENST00000397222 KCNA4P22459 653 aa16.77■□□□□ 0.28
PCNAP3-201ENST00000397222 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
PCNAP3-201ENST00000397222 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
PCNAP3-201ENST00000397222 CUX2O14529 1486 aa16.3■□□□□ 0.2
PCNAP3-201ENST00000397222 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
PCNAP3-201ENST00000397222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
PCNAP3-201ENST00000397222 NCAPD3P42695 1498 aa16.19■□□□□ 0.18
PCNAP3-201ENST00000397222 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
PCNAP3-201ENST00000397222 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
PCNAP3-201ENST00000397222 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
PCNAP3-201ENST00000397222 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
PCNAP3-201ENST00000397222 SMARCA2P51531 1590 aa16.07■□□□□ 0.16
PCNAP3-201ENST00000397222 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
PCNAP3-201ENST00000397222 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
PCNAP3-201ENST00000397222 U3KPZ7 1027 aaPredicted RBP16.01■□□□□ 0.15
PCNAP3-201ENST00000397222 NESP48681 1621 aa15.98■□□□□ 0.15
PCNAP3-201ENST00000397222 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
PCNAP3-201ENST00000397222 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
PCNAP3-201ENST00000397222 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
PCNAP3-201ENST00000397222 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
PCNAP3-201ENST00000397222 LAMC3Q9Y6N6 1575 aa15.91■□□□□ 0.14
PCNAP3-201ENST00000397222 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.12
PCNAP3-201ENST00000397222 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
PCNAP3-201ENST00000397222 PDS5BQ9NTI5 1447 aa15.77■□□□□ 0.11
PCNAP3-201ENST00000397222 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
PCNAP3-201ENST00000397222 SPINK5Q9NQ38 1064 aaPredicted RBP15.71■□□□□ 0.11
PCNAP3-201ENST00000397222 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
PCNAP3-201ENST00000397222 WDR62O43379 1518 aa15.68■□□□□ 0.1
PCNAP3-201ENST00000397222 CADPSQ9ULU8 1353 aa15.65■□□□□ 0.1
PCNAP3-201ENST00000397222 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
PCNAP3-201ENST00000397222 CAPN15O75808 1086 aa15.59■□□□□ 0.09
PCNAP3-201ENST00000397222 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
PCNAP3-201ENST00000397222 WIZO95785 1651 aa15.54■□□□□ 0.08
PCNAP3-201ENST00000397222 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
PCNAP3-201ENST00000397222 FOXD4L1Q9NU39 408 aa15.5■□□□□ 0.07
PCNAP3-201ENST00000397222 FANCD2Q9BXW9 1451 aa15.49■□□□□ 0.07
PCNAP3-201ENST00000397222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
PCNAP3-201ENST00000397222 DSG3P32926 999 aa15.49■□□□□ 0.07
PCNAP3-201ENST00000397222 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
PCNAP3-201ENST00000397222 ZBTB22O15209 634 aa15.47■□□□□ 0.07
PCNAP3-201ENST00000397222 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
PCNAP3-201ENST00000397222 CFTRP13569 1480 aa15.45■□□□□ 0.06
PCNAP3-201ENST00000397222 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
PCNAP3-201ENST00000397222 APLP2Q06481 763 aa15.41■□□□□ 0.06
PCNAP3-201ENST00000397222 OSCARQ8IYS5 282 aa15.39■□□□□ 0.05
PCNAP3-201ENST00000397222 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
PCNAP3-201ENST00000397222 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
PCNAP3-201ENST00000397222 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
PCNAP3-201ENST00000397222 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
PCNAP3-201ENST00000397222 RIMBP3CA6NJZ7 1639 aa15.32■□□□□ 0.04
PCNAP3-201ENST00000397222 RIMBP3BA6NNM3 1639 aa15.32■□□□□ 0.04
PCNAP3-201ENST00000397222 RIMBP3Q9UFD9 1639 aa15.32■□□□□ 0.04
PCNAP3-201ENST00000397222 ABCB7O75027 752 aa15.31■□□□□ 0.04
PCNAP3-201ENST00000397222 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
PCNAP3-201ENST00000397222 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
PCNAP3-201ENST00000397222 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
PCNAP3-201ENST00000397222 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
PCNAP3-201ENST00000397222 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
PCNAP3-201ENST00000397222 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
PCNAP3-201ENST00000397222 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
PCNAP3-201ENST00000397222 ABCC8Q09428 1581 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms