Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 AC016582.1-202ENST00000636341 2982 ntBASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 FCGR2A-202ENST00000367972 1399 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 AC074198.1-201ENST00000506546 1397 ntBASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 ZNF710-AS1-202ENST00000620791 2133 ntBASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
NPIPA3F8WFD2 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 CREM-212ENST00000374728 1933 ntTSL 5 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 HSP90AB2P-201ENST00000507090 2176 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 TRAF6P1-201ENST00000429404 1558 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AP003175.1-201ENST00000641383 6658 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 RNU1-11P-201ENST00000383975 164 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 KRT18P52-201ENST00000404956 846 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 RPSAP62-201ENST00000432596 833 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 ATP5LP4-201ENST00000434169 307 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 RPSAP49-201ENST00000445182 886 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 RPS18P13-201ENST00000461260 454 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC022730.2-201ENST00000465359 452 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC093297.2-201ENST00000503452 738 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 CAPSL-204ENST00000514524 656 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 IGHV7-40-201ENST00000520963 296 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AP001124.1-201ENST00000529628 385 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC133569.1-201ENST00000564327 373 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC090371.1-201ENST00000580071 558 ntTSL 4 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 RPS11-202ENST00000594493 575 ntTSL 3 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC087623.4-201ENST00000606593 695 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AL353898.2-201ENST00000623000 255 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC145207.5-201ENST00000582866 2682 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 SLC16A1P1-201ENST00000486743 1510 ntBASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 AC016027.2-201ENST00000441167 2493 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPIPA3F8WFD2 CDYLP1-201ENST00000419017 1458 ntBASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 TRDMT1-210ENST00000488990 1301 ntTSL 2 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
NPIPA3F8WFD2 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms