RNA–Protein interactions for RNA: ENST00000488990.5

TRDMT1-210, Transcript of tRNA aspartic acid methyltransferase 1, humanhuman

TSL 2 BASIC

Gene TRDMT1, Length 1,301 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDMT1-210ENST00000488990 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
TRDMT1-210ENST00000488990 CHIC1Q5VXU3 224 aa27.26■■□□□ 1.95
TRDMT1-210ENST00000488990 PHF23Q9BUL5 403 aaPredicted RBP24.02■■□□□ 1.44
TRDMT1-210ENST00000488990 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
TRDMT1-210ENST00000488990 FOXD1Q16676 465 aa22.09■■□□□ 1.13
TRDMT1-210ENST00000488990 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
TRDMT1-210ENST00000488990 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
TRDMT1-210ENST00000488990 ADRA2BP18089 450 aa21.19■□□□□ 0.98
TRDMT1-210ENST00000488990 PIAS4Q8N2W9 510 aaPredicted RBP20.77■□□□□ 0.91
TRDMT1-210ENST00000488990 MSH5O43196 834 aa20.34■□□□□ 0.85
TRDMT1-210ENST00000488990 NISCHQ9Y2I1 1504 aa20.21■□□□□ 0.83
TRDMT1-210ENST00000488990 ABCC9O60706 1549 aa19.98■□□□□ 0.79
TRDMT1-210ENST00000488990 DNAJC5BQ9UF47 199 aa19.87■□□□□ 0.77
TRDMT1-210ENST00000488990 PPP4R3CPQ6ZMV5 832 aa19.48■□□□□ 0.71
TRDMT1-210ENST00000488990 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
TRDMT1-210ENST00000488990 MAPK8IP2Q13387 824 aaPredicted RBP19.27■□□□□ 0.68
TRDMT1-210ENST00000488990 DNAJC5Q9H3Z4 198 aa19.11■□□□□ 0.65
TRDMT1-210ENST00000488990 DMRT2Q9Y5R5 561 aa18.96■□□□□ 0.63
TRDMT1-210ENST00000488990 KCNA4P22459 653 aa18.93■□□□□ 0.62
TRDMT1-210ENST00000488990 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
TRDMT1-210ENST00000488990 NCBP3Q53F19 620 aaKnown RBP18.9■□□□□ 0.62
TRDMT1-210ENST00000488990 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
TRDMT1-210ENST00000488990 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
TRDMT1-210ENST00000488990 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
TRDMT1-210ENST00000488990 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.57
TRDMT1-210ENST00000488990 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
TRDMT1-210ENST00000488990 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
TRDMT1-210ENST00000488990 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
TRDMT1-210ENST00000488990 UNC13AQ9UPW8 1703 aa18.19■□□□□ 0.5
TRDMT1-210ENST00000488990 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
TRDMT1-210ENST00000488990 CECR2Q9BXF3 1484 aa18.1■□□□□ 0.49
TRDMT1-210ENST00000488990 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
TRDMT1-210ENST00000488990 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
TRDMT1-210ENST00000488990 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
TRDMT1-210ENST00000488990 NACADO15069 1562 aa17.95■□□□□ 0.46
TRDMT1-210ENST00000488990 TRIM41Q8WV44 630 aa17.81■□□□□ 0.44
TRDMT1-210ENST00000488990 CUX2O14529 1486 aa17.67■□□□□ 0.42
TRDMT1-210ENST00000488990 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
TRDMT1-210ENST00000488990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.65■□□□□ 0.42
TRDMT1-210ENST00000488990 EIF4G1Q04637 1599 aaKnown RBP17.63■□□□□ 0.41
TRDMT1-210ENST00000488990 DCAF8L2P0C7V8 631 aa17.62■□□□□ 0.41
TRDMT1-210ENST00000488990 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
TRDMT1-210ENST00000488990 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
TRDMT1-210ENST00000488990 ZBTB22O15209 634 aa17.43■□□□□ 0.38
TRDMT1-210ENST00000488990 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
TRDMT1-210ENST00000488990 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
TRDMT1-210ENST00000488990 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
TRDMT1-210ENST00000488990 ERCC6Q03468 1493 aa17.3■□□□□ 0.36
TRDMT1-210ENST00000488990 CSRNP3Q8WYN3 585 aa17.26■□□□□ 0.35
TRDMT1-210ENST00000488990 C1QBPQ07021 282 aaKnown RBP17.23■□□□□ 0.35
TRDMT1-210ENST00000488990 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
TRDMT1-210ENST00000488990 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
TRDMT1-210ENST00000488990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
TRDMT1-210ENST00000488990 CACNB1Q02641 598 aaPredicted RBP17.06■□□□□ 0.32
TRDMT1-210ENST00000488990 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
TRDMT1-210ENST00000488990 SCRIBQ14160 1630 aa17.04■□□□□ 0.32
TRDMT1-210ENST00000488990 SAMD1Q6SPF0 538 aaPredicted RBP17.01■□□□□ 0.31
TRDMT1-210ENST00000488990 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
TRDMT1-210ENST00000488990 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
TRDMT1-210ENST00000488990 APLP2Q06481 763 aa16.89■□□□□ 0.29
TRDMT1-210ENST00000488990 CAPN15O75808 1086 aa16.83■□□□□ 0.28
TRDMT1-210ENST00000488990 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
TRDMT1-210ENST00000488990 NESP48681 1621 aa16.83■□□□□ 0.28
TRDMT1-210ENST00000488990 ATXN8OSP0DMR3 200 aa16.82■□□□□ 0.28
TRDMT1-210ENST00000488990 TRHP20396 242 aaPredicted RBP16.74■□□□□ 0.27
TRDMT1-210ENST00000488990 BAZ1AQ9NRL2 1556 aaPredicted RBP16.73■□□□□ 0.27
TRDMT1-210ENST00000488990 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
TRDMT1-210ENST00000488990 ZNF219Q9P2Y4 722 aaPredicted RBP16.7■□□□□ 0.26
TRDMT1-210ENST00000488990 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
TRDMT1-210ENST00000488990 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
TRDMT1-210ENST00000488990 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
TRDMT1-210ENST00000488990 KIF21AQ7Z4S6 1674 aa16.64■□□□□ 0.25
TRDMT1-210ENST00000488990 ILDR1Q86SU0 546 aaPredicted RBP16.63■□□□□ 0.25
TRDMT1-210ENST00000488990 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
TRDMT1-210ENST00000488990 DSG3P32926 999 aa16.6■□□□□ 0.25
TRDMT1-210ENST00000488990 NCAPD3P42695 1498 aa16.56■□□□□ 0.24
TRDMT1-210ENST00000488990 DCAF1Q9Y4B6 1507 aa16.56■□□□□ 0.24
TRDMT1-210ENST00000488990 ABCB7O75027 752 aa16.52■□□□□ 0.24
TRDMT1-210ENST00000488990 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
TRDMT1-210ENST00000488990 POLA2Q14181 598 aa16.46■□□□□ 0.23
TRDMT1-210ENST00000488990 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
TRDMT1-210ENST00000488990 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
TRDMT1-210ENST00000488990 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
TRDMT1-210ENST00000488990 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
TRDMT1-210ENST00000488990 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
TRDMT1-210ENST00000488990 WDR62O43379 1518 aa16.34■□□□□ 0.21
TRDMT1-210ENST00000488990 PDS5BQ9NTI5 1447 aa16.33■□□□□ 0.21
TRDMT1-210ENST00000488990 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
TRDMT1-210ENST00000488990 ARAP1Q96P48 1450 aa16.2■□□□□ 0.18
TRDMT1-210ENST00000488990 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
TRDMT1-210ENST00000488990 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
TRDMT1-210ENST00000488990 SMARCA4P51532 1647 aa16.09■□□□□ 0.17
TRDMT1-210ENST00000488990 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
TRDMT1-210ENST00000488990 FBLN2P98095 1184 aa16.04■□□□□ 0.16
TRDMT1-210ENST00000488990 CEP164Q9UPV0 1460 aa16■□□□□ 0.15
TRDMT1-210ENST00000488990 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
TRDMT1-210ENST00000488990 CHD1O14646 1710 aa15.95■□□□□ 0.14
TRDMT1-210ENST00000488990 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
TRDMT1-210ENST00000488990 RSF1Q96T23 1441 aaPredicted RBP15.88■□□□□ 0.13
TRDMT1-210ENST00000488990 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms