Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC30.67■■■□□ 2.5
CDC42BPBQ9Y5S2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDC42BPBQ9Y5S2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC30.66■■■□□ 2.5
CDC42BPBQ9Y5S2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CDC42BPBQ9Y5S2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC30.66■■■□□ 2.5
CDC42BPBQ9Y5S2 AC244015.2-201ENST00000616358 1861 ntBASIC30.66■■■□□ 2.5
CDC42BPBQ9Y5S2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CDC42BPBQ9Y5S2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CDC42BPBQ9Y5S2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC30.65■■■□□ 2.5
CDC42BPBQ9Y5S2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 MESTP1-201ENST00000404287 994 ntBASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
CDC42BPBQ9Y5S2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.49
CDC42BPBQ9Y5S2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CDC42BPBQ9Y5S2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC30.63■■■□□ 2.49
CDC42BPBQ9Y5S2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDC42BPBQ9Y5S2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CDC42BPBQ9Y5S2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC30.63■■■□□ 2.49
CDC42BPBQ9Y5S2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC30.63■■■□□ 2.49
CDC42BPBQ9Y5S2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDC42BPBQ9Y5S2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CDC42BPBQ9Y5S2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC30.63■■■□□ 2.49
CDC42BPBQ9Y5S2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 AC026271.3-201ENST00000571884 352 ntBASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 H19-201ENST00000411754 1788 ntTSL 5 BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CDC42BPBQ9Y5S2 NAPSB-206ENST00000562112 1266 ntBASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 ABBA01031674.1-201ENST00000635145 728 ntBASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDC42BPBQ9Y5S2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDC42BPBQ9Y5S2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDC42BPBQ9Y5S2 AC005363.2-201ENST00000618631 242 ntBASIC30.6■■■□□ 2.49
CDC42BPBQ9Y5S2 Z98882.1-201ENST00000622160 2253 ntBASIC30.6■■■□□ 2.49
CDC42BPBQ9Y5S2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDC42BPBQ9Y5S2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC30.6■■■□□ 2.49
CDC42BPBQ9Y5S2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CDC42BPBQ9Y5S2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC30.6■■■□□ 2.49
CDC42BPBQ9Y5S2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPBQ9Y5S2 DUX4L26-201ENST00000489078 1255 ntBASIC30.59■■■□□ 2.49
CDC42BPBQ9Y5S2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPBQ9Y5S2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC30.59■■■□□ 2.49
CDC42BPBQ9Y5S2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CDC42BPBQ9Y5S2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC30.59■■■□□ 2.49
CDC42BPBQ9Y5S2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.59■■■□□ 2.49
CDC42BPBQ9Y5S2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC30.59■■■□□ 2.49
CDC42BPBQ9Y5S2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CDC42BPBQ9Y5S2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CDC42BPBQ9Y5S2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CDC42BPBQ9Y5S2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CDC42BPBQ9Y5S2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC30.58■■■□□ 2.49
CDC42BPBQ9Y5S2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms