Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCN4Q9Y3Q4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HCN4Q9Y3Q4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 AC242852.2-201ENST00000615738 1807 ntBASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 AC245052.3-201ENST00000450182 901 ntBASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 C2orf69P3-201ENST00000565542 1120 ntBASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 AL121956.5-201ENST00000625261 221 ntBASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HCN4Q9Y3Q4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 FDX1P1-201ENST00000449115 551 ntBASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 AP002982.1-201ENST00000492365 877 ntBASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 AC061975.6-201ENST00000579045 1553 ntBASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.66■□□□□ 0.9
HCN4Q9Y3Q4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HCN4Q9Y3Q4 LINC01960-201ENST00000563759 1884 ntBASIC20.64■□□□□ 0.9
HCN4Q9Y3Q4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HCN4Q9Y3Q4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN4Q9Y3Q4 RNF152P1-201ENST00000397754 604 ntBASIC20.64■□□□□ 0.89
HCN4Q9Y3Q4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.64■□□□□ 0.89
HCN4Q9Y3Q4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.64■□□□□ 0.89
HCN4Q9Y3Q4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.64■□□□□ 0.89
HCN4Q9Y3Q4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HCN4Q9Y3Q4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN4Q9Y3Q4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN4Q9Y3Q4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HCN4Q9Y3Q4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCN4Q9Y3Q4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCN4Q9Y3Q4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HCN4Q9Y3Q4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCN4Q9Y3Q4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms