Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 AP000593.1-201ENST00000393668 712 ntBASIC19.03■□□□□ 0.64
LHX6Q9UPM6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.03■□□□□ 0.64
LHX6Q9UPM6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LHX6Q9UPM6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 FITM1-202ENST00000559294 800 ntBASIC19.02■□□□□ 0.64
LHX6Q9UPM6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.02■□□□□ 0.64
LHX6Q9UPM6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
LHX6Q9UPM6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LHX6Q9UPM6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
LHX6Q9UPM6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
LHX6Q9UPM6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LHX6Q9UPM6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 AC245052.3-201ENST00000450182 901 ntBASIC19.01■□□□□ 0.63
LHX6Q9UPM6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 AC006538.3-201ENST00000612495 578 ntBASIC19.01■□□□□ 0.63
LHX6Q9UPM6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX6Q9UPM6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LHX6Q9UPM6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19■□□□□ 0.63
LHX6Q9UPM6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LHX6Q9UPM6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19■□□□□ 0.63
LHX6Q9UPM6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19■□□□□ 0.63
LHX6Q9UPM6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
LHX6Q9UPM6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19■□□□□ 0.63
LHX6Q9UPM6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19■□□□□ 0.63
LHX6Q9UPM6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19■□□□□ 0.63
LHX6Q9UPM6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19■□□□□ 0.63
LHX6Q9UPM6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19■□□□□ 0.63
LHX6Q9UPM6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19■□□□□ 0.63
LHX6Q9UPM6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LHX6Q9UPM6 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC19■□□□□ 0.63
LHX6Q9UPM6 AC093458.2-201ENST00000623150 629 ntBASIC19■□□□□ 0.63
LHX6Q9UPM6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX6Q9UPM6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LHX6Q9UPM6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LHX6Q9UPM6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LHX6Q9UPM6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
LHX6Q9UPM6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX6Q9UPM6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 KRT16P5-201ENST00000455284 522 ntBASIC18.99■□□□□ 0.63
LHX6Q9UPM6 AC063952.2-201ENST00000498792 1227 ntBASIC18.99■□□□□ 0.63
LHX6Q9UPM6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 AC005829.2-201ENST00000571422 1056 ntBASIC18.99■□□□□ 0.63
LHX6Q9UPM6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.99■□□□□ 0.63
LHX6Q9UPM6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms