Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 MIR4651-201ENST00000582622 73 ntBASIC20.32■□□□□ 0.84
APPL1Q9UKG1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
APPL1Q9UKG1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 KRT8P36-201ENST00000489121 1440 ntBASIC20.31■□□□□ 0.84
APPL1Q9UKG1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 FAM201B-201ENST00000458407 597 ntBASIC20.31■□□□□ 0.84
APPL1Q9UKG1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 AL356652.1-201ENST00000615962 565 ntBASIC20.31■□□□□ 0.84
APPL1Q9UKG1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
APPL1Q9UKG1 LINC01006-201ENST00000333319 2292 ntBASIC20.3■□□□□ 0.84
APPL1Q9UKG1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 KRT18P68-201ENST00000392293 1000 ntBASIC20.3■□□□□ 0.84
APPL1Q9UKG1 BX276092.2-201ENST00000417668 665 ntBASIC20.3■□□□□ 0.84
APPL1Q9UKG1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 CYP2T3P-201ENST00000601990 817 ntBASIC20.3■□□□□ 0.84
APPL1Q9UKG1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
APPL1Q9UKG1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.29■□□□□ 0.84
APPL1Q9UKG1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.28■□□□□ 0.84
APPL1Q9UKG1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms