Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC116562.2-201ENST00000507042 360 ntBASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC010203.1-204ENST00000548782 407 ntBASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 FITM1-202ENST00000559294 800 ntBASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 NTF6B-201ENST00000591913 560 ntBASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 AL590326.2-201ENST00000625139 305 ntBASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC10.51□□□□□ -0.73
KRTAP4-1Q9BYQ7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 AP002982.1-201ENST00000492365 877 ntBASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
KRTAP4-1Q9BYQ7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 INGX-201ENST00000359239 846 ntBASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 SLC25A3P1-201ENST00000443844 931 ntBASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 DUX4L26-201ENST00000489078 1255 ntBASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 WWOX-216ENST00000569818 525 ntBASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 AL121906.2-201ENST00000621597 723 ntBASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 ECEL1P1-201ENST00000373592 1742 ntBASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
KRTAP4-1Q9BYQ7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms