Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40CQ96S21 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40CQ96S21 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RAB40CQ96S21 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.29■□□□□ 0.2
RAB40CQ96S21 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40CQ96S21 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40CQ96S21 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40CQ96S21 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB40CQ96S21 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB40CQ96S21 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40CQ96S21 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40CQ96S21 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40CQ96S21 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB40CQ96S21 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40CQ96S21 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB40CQ96S21 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40CQ96S21 AC024257.2-201ENST00000549699 147 ntBASIC16.28■□□□□ 0.2
RAB40CQ96S21 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40CQ96S21 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40CQ96S21 RARRES2P11-201ENST00000635158 484 ntBASIC16.28■□□□□ 0.2
RAB40CQ96S21 AC093484.2-201ENST00000580996 2166 ntBASIC16.28■□□□□ 0.2
RAB40CQ96S21 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB40CQ96S21 AC116050.2-201ENST00000612102 1779 ntBASIC16.28■□□□□ 0.2
RAB40CQ96S21 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40CQ96S21 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40CQ96S21 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40CQ96S21 AL691432.2-201ENST00000607222 2038 ntBASIC16.28■□□□□ 0.2
RAB40CQ96S21 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB40CQ96S21 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RAB40CQ96S21 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 AC135279.3-201ENST00000610945 1311 ntBASIC16.27■□□□□ 0.2
RAB40CQ96S21 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 AC120498.9-201ENST00000339021 3867 ntBASIC16.27■□□□□ 0.2
RAB40CQ96S21 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RAB40CQ96S21 PBX2P1-201ENST00000493219 1291 ntBASIC16.27■□□□□ 0.2
RAB40CQ96S21 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB40CQ96S21 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40CQ96S21 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB40CQ96S21 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB40CQ96S21 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RAB40CQ96S21 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40CQ96S21 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40CQ96S21 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 MIR4767-201ENST00000582827 78 ntBASIC16.26■□□□□ 0.19
RAB40CQ96S21 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40CQ96S21 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40CQ96S21 BX119927.1-201ENST00000636596 1552 ntBASIC16.26■□□□□ 0.19
RAB40CQ96S21 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 DPP3P2-201ENST00000416030 1696 ntBASIC16.25■□□□□ 0.19
RAB40CQ96S21 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB40CQ96S21 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RAB40CQ96S21 KRT16P2-201ENST00000414673 1423 ntBASIC16.25■□□□□ 0.19
RAB40CQ96S21 TREX1-205ENST00000625293 1783 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms