Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 LTB4R2-202ENST00000528054 3092 ntBASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 AC103834.1-201ENST00000520383 144 ntBASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3IPQ96QF0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 AC241377.3-202ENST00000626088 1088 ntBASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 AC241585.3-202ENST00000628937 1088 ntBASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 AC245100.8-202ENST00000629247 1058 ntBASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 LINC01465-201ENST00000408887 1940 ntBASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3IPQ96QF0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 KRT8P33-201ENST00000508125 1423 ntBASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 YBX1P4-201ENST00000392794 808 ntBASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB3IPQ96QF0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
RAB3IPQ96QF0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3IPQ96QF0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3IPQ96QF0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3IPQ96QF0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB3IPQ96QF0 OR2I1P-207ENST00000453522 948 ntBASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB3IPQ96QF0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB3IPQ96QF0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms