Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NECTIN4Q96NY8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 HLA-G-202ENST00000376815 851 ntBASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 HLA-G-203ENST00000376818 1127 ntBASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 KRT8P36-201ENST00000489121 1440 ntBASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 AC087388.1-201ENST00000571370 1112 ntBASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NECTIN4Q96NY8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 AC079834.2-201ENST00000609776 1949 ntBASIC20.9■□□□□ 0.94
NECTIN4Q96NY8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NECTIN4Q96NY8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.89■□□□□ 0.94
NECTIN4Q96NY8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NECTIN4Q96NY8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NECTIN4Q96NY8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.89■□□□□ 0.94
NECTIN4Q96NY8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NECTIN4Q96NY8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
NECTIN4Q96NY8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 LIN28AP1-201ENST00000429574 405 ntBASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NECTIN4Q96NY8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.88■□□□□ 0.93
NECTIN4Q96NY8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NECTIN4Q96NY8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NECTIN4Q96NY8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NECTIN4Q96NY8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NECTIN4Q96NY8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.87■□□□□ 0.93
NECTIN4Q96NY8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms