Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 AC008550.1-201ENST00000511500 884 ntBASIC18.06■□□□□ 0.48
LRRC46Q96FV0 C1QBPP2-201ENST00000528754 825 ntBASIC18.06■□□□□ 0.48
LRRC46Q96FV0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC46Q96FV0 AC080038.3-201ENST00000623346 1952 ntBASIC18.06■□□□□ 0.48
LRRC46Q96FV0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 SOX15-203ENST00000570788 1093 ntBASIC18.05■□□□□ 0.48
LRRC46Q96FV0 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 AL359736.2-201ENST00000621992 437 ntBASIC18.05■□□□□ 0.48
LRRC46Q96FV0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC46Q96FV0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC46Q96FV0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 RPPH1-201ENST00000516869 333 ntBASIC18.03■□□□□ 0.48
LRRC46Q96FV0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 AC008403.3-201ENST00000598924 454 ntBASIC18.03■□□□□ 0.48
LRRC46Q96FV0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.03■□□□□ 0.48
LRRC46Q96FV0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC46Q96FV0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms