Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF25Q96BH1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF25Q96BH1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF25Q96BH1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF25Q96BH1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF25Q96BH1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF25Q96BH1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF25Q96BH1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF25Q96BH1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF25Q96BH1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF25Q96BH1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF25Q96BH1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF25Q96BH1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF25Q96BH1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RNF25Q96BH1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF25Q96BH1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF25Q96BH1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF25Q96BH1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF25Q96BH1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.08■□□□□ 0.97
RNF25Q96BH1 AC016405.3-201ENST00000607710 860 ntBASIC21.08■□□□□ 0.97
RNF25Q96BH1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF25Q96BH1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.08■□□□□ 0.96
RNF25Q96BH1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RNF25Q96BH1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.08■□□□□ 0.96
RNF25Q96BH1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RNF25Q96BH1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF25Q96BH1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 KRT18P11-201ENST00000435214 1283 ntBASIC21.07■□□□□ 0.96
RNF25Q96BH1 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 RARRES2P6-201ENST00000567333 442 ntBASIC21.07■□□□□ 0.96
RNF25Q96BH1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 MFSD11-216ENST00000590393 1141 ntBASIC21.07■□□□□ 0.96
RNF25Q96BH1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF25Q96BH1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF25Q96BH1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 AC016769.1-201ENST00000409132 1010 ntBASIC21.06■□□□□ 0.96
RNF25Q96BH1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
RNF25Q96BH1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF25Q96BH1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms