Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB40AQ8WXH6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 KRT18P11-201ENST00000435214 1283 ntBASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 AC104187.1-201ENST00000607510 612 ntBASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB40AQ8WXH6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 AC090192.1-201ENST00000517740 490 ntBASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB40AQ8WXH6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RAB40AQ8WXH6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB40AQ8WXH6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms