Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 RBM17P2-201ENST00000616397 1405 ntBASIC20.53■□□□□ 0.88
SCG3Q8WXD2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 TMEM191A-211ENST00000637163 1067 ntBASIC20.53■□□□□ 0.88
SCG3Q8WXD2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.53■□□□□ 0.88
SCG3Q8WXD2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 MIPEPP3-201ENST00000412105 444 ntBASIC20.52■□□□□ 0.88
SCG3Q8WXD2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 AC007225.1-201ENST00000566331 1836 ntBASIC20.52■□□□□ 0.88
SCG3Q8WXD2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCG3Q8WXD2 AC087289.5-201ENST00000586076 3175 ntBASIC20.52■□□□□ 0.87
SCG3Q8WXD2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.52■□□□□ 0.87
SCG3Q8WXD2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCG3Q8WXD2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCG3Q8WXD2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SCG3Q8WXD2 AC116050.2-201ENST00000612102 1779 ntBASIC20.51■□□□□ 0.87
SCG3Q8WXD2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 AC016405.3-201ENST00000607710 860 ntBASIC20.51■□□□□ 0.87
SCG3Q8WXD2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SCG3Q8WXD2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 AP005212.1-201ENST00000581547 1997 ntBASIC20.5■□□□□ 0.87
SCG3Q8WXD2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCG3Q8WXD2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 AC027702.1-201ENST00000563810 1770 ntBASIC20.49■□□□□ 0.87
SCG3Q8WXD2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.49■□□□□ 0.87
SCG3Q8WXD2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCG3Q8WXD2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCG3Q8WXD2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms