Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAF3IP1Q8TDR0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 RARRES2P4-201ENST00000514074 484 ntBASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 AC231657.2-201ENST00000624556 255 ntBASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 AC008694.1-202ENST00000636953 945 ntBASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 AC068338.2-201ENST00000563278 1430 ntBASIC20.95■□□□□ 0.94
TRAF3IP1Q8TDR0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 AC069236.1-201ENST00000604339 616 ntBASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAF3IP1Q8TDR0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 AC007322.1-201ENST00000426983 750 ntBASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 AC022517.1-201ENST00000592429 346 ntBASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAF3IP1Q8TDR0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 MCRIP2P1-201ENST00000394346 511 ntBASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 CYP2T1P-201ENST00000432607 1285 ntBASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAF3IP1Q8TDR0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 AC100791.3-201ENST00000617619 330 ntBASIC20.91■□□□□ 0.94
TRAF3IP1Q8TDR0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms