Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPS4Y2Q8TD47 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 AC009237.14-201ENST00000609975 1594 ntBASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPS4Y2Q8TD47 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.58■□□□□ 0.41
RPS4Y2Q8TD47 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RPS4Y2Q8TD47 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.58■□□□□ 0.41
RPS4Y2Q8TD47 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPS4Y2Q8TD47 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPS4Y2Q8TD47 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 Z82202.1-201ENST00000623446 1880 ntBASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RPS4Y2Q8TD47 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 RARRES2P6-201ENST00000567333 442 ntBASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPS4Y2Q8TD47 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 LINC02228-203ENST00000641970 1355 ntBASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RPS4Y2Q8TD47 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms