Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 DPP3P2-201ENST00000416030 1696 ntBASIC21.67■■□□□ 1.06
BEST2Q8NFU1 PTBP1P-201ENST00000554374 1601 ntBASIC21.67■■□□□ 1.06
BEST2Q8NFU1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BEST2Q8NFU1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST2Q8NFU1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 AL031963.3-201ENST00000606441 850 ntBASIC21.65■■□□□ 1.06
BEST2Q8NFU1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BEST2Q8NFU1 KRT8P20-201ENST00000423953 1409 ntBASIC21.64■■□□□ 1.06
BEST2Q8NFU1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
BEST2Q8NFU1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BEST2Q8NFU1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BEST2Q8NFU1 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.64■■□□□ 1.05
BEST2Q8NFU1 AC069544.1-201ENST00000609399 999 ntBASIC21.64■■□□□ 1.05
BEST2Q8NFU1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
BEST2Q8NFU1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
BEST2Q8NFU1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BEST2Q8NFU1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.64■■□□□ 1.05
BEST2Q8NFU1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 AC093827.2-201ENST00000512654 315 ntBASIC21.63■■□□□ 1.05
BEST2Q8NFU1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BEST2Q8NFU1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
BEST2Q8NFU1 KRT8P17-201ENST00000453110 1448 ntBASIC21.62■■□□□ 1.05
BEST2Q8NFU1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.61■■□□□ 1.05
BEST2Q8NFU1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.61■■□□□ 1.05
BEST2Q8NFU1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BEST2Q8NFU1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BEST2Q8NFU1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms