Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHDHQ8NE62 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CHDHQ8NE62 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHDHQ8NE62 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHDHQ8NE62 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.01■□□□□ 0.63
CHDHQ8NE62 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHDHQ8NE62 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHDHQ8NE62 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHDHQ8NE62 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHDHQ8NE62 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CHDHQ8NE62 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHDHQ8NE62 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHDHQ8NE62 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19■□□□□ 0.63
CHDHQ8NE62 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19■□□□□ 0.63
CHDHQ8NE62 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19■□□□□ 0.63
CHDHQ8NE62 AL355802.2-201ENST00000402069 882 ntBASIC19■□□□□ 0.63
CHDHQ8NE62 KRT18P11-201ENST00000435214 1283 ntBASIC19■□□□□ 0.63
CHDHQ8NE62 AC006970.2-201ENST00000450065 779 ntBASIC19■□□□□ 0.63
CHDHQ8NE62 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHDHQ8NE62 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19■□□□□ 0.63
CHDHQ8NE62 MIR2861-201ENST00000636310 90 ntBASIC19■□□□□ 0.63
CHDHQ8NE62 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CHDHQ8NE62 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CHDHQ8NE62 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHDHQ8NE62 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19■□□□□ 0.63
CHDHQ8NE62 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19■□□□□ 0.63
CHDHQ8NE62 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHDHQ8NE62 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHDHQ8NE62 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHDHQ8NE62 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHDHQ8NE62 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
CHDHQ8NE62 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CHDHQ8NE62 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.99■□□□□ 0.63
CHDHQ8NE62 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CHDHQ8NE62 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHDHQ8NE62 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.99■□□□□ 0.63
CHDHQ8NE62 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.99■□□□□ 0.63
CHDHQ8NE62 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 AC006015.1-201ENST00000429970 570 ntBASIC18.99■□□□□ 0.63
CHDHQ8NE62 AC010536.3-201ENST00000620306 533 ntBASIC18.99■□□□□ 0.63
CHDHQ8NE62 AC073111.5-205ENST00000641717 521 ntBASIC18.99■□□□□ 0.63
CHDHQ8NE62 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHDHQ8NE62 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHDHQ8NE62 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
CHDHQ8NE62 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.98■□□□□ 0.63
CHDHQ8NE62 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.98■□□□□ 0.63
CHDHQ8NE62 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 TERF1P5-201ENST00000477545 1207 ntBASIC18.98■□□□□ 0.63
CHDHQ8NE62 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CHDHQ8NE62 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.98■□□□□ 0.63
CHDHQ8NE62 AL109923.1-201ENST00000618799 583 ntBASIC18.98■□□□□ 0.63
CHDHQ8NE62 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.98■□□□□ 0.63
CHDHQ8NE62 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHDHQ8NE62 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHDHQ8NE62 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHDHQ8NE62 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHDHQ8NE62 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHDHQ8NE62 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHDHQ8NE62 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHDHQ8NE62 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHDHQ8NE62 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHDHQ8NE62 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.97■□□□□ 0.63
CHDHQ8NE62 CDCA4P2-201ENST00000441182 718 ntBASIC18.97■□□□□ 0.63
CHDHQ8NE62 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.97■□□□□ 0.63
CHDHQ8NE62 CDV3P1-201ENST00000471403 739 ntBASIC18.97■□□□□ 0.63
CHDHQ8NE62 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHDHQ8NE62 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.97■□□□□ 0.63
CHDHQ8NE62 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms