Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF169Q8NCN4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 KRT8P36-201ENST00000489121 1440 ntBASIC21.93■■□□□ 1.1
RNF169Q8NCN4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF169Q8NCN4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 AC110285.5-201ENST00000611501 352 ntBASIC21.92■■□□□ 1.1
RNF169Q8NCN4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF169Q8NCN4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 RPS2P55-201ENST00000397318 883 ntBASIC21.91■■□□□ 1.1
RNF169Q8NCN4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 AC107956.1-201ENST00000494359 873 ntBASIC21.91■■□□□ 1.1
RNF169Q8NCN4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 PRKY-204ENST00000533551 1019 ntBASIC21.91■■□□□ 1.1
RNF169Q8NCN4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF169Q8NCN4 AC124283.5-201ENST00000624661 1809 ntBASIC21.91■■□□□ 1.1
RNF169Q8NCN4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 AF106564.1-201ENST00000607058 2553 ntBASIC21.9■■□□□ 1.1
RNF169Q8NCN4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 TSPY7P-201ENST00000431358 1114 ntBASIC21.9■■□□□ 1.1
RNF169Q8NCN4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 AC133681.1-201ENST00000465482 601 ntBASIC21.9■■□□□ 1.1
RNF169Q8NCN4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF169Q8NCN4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF169Q8NCN4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.89■■□□□ 1.1
RNF169Q8NCN4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF169Q8NCN4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF169Q8NCN4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF169Q8NCN4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF169Q8NCN4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF169Q8NCN4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF169Q8NCN4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF169Q8NCN4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms