Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC073508.3-201ENST00000619697 1419 ntBASIC19.12■□□□□ 0.65
COL27A1Q8IZC6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 TERF1P1-201ENST00000311003 1181 ntBASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 AL024507.2-201ENST00000606070 2574 ntBASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COL27A1Q8IZC6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 SLC25A3P1-201ENST00000443844 931 ntBASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL27A1Q8IZC6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 KSR1P1-201ENST00000446298 240 ntBASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 AL049597.2-201ENST00000565575 961 ntBASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL27A1Q8IZC6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL27A1Q8IZC6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL27A1Q8IZC6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL27A1Q8IZC6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL27A1Q8IZC6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL27A1Q8IZC6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
COL27A1Q8IZC6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 AC004264.1-201ENST00000608354 794 ntBASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 MESTP1-201ENST00000404287 994 ntBASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 MIR1238-201ENST00000408483 83 ntBASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL27A1Q8IZC6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.06■□□□□ 0.64
COL27A1Q8IZC6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms