Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LYSMD2Q8IV50 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD2Q8IV50 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.64■□□□□ 0.42
LYSMD2Q8IV50 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LYSMD2Q8IV50 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.64■□□□□ 0.42
LYSMD2Q8IV50 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LYSMD2Q8IV50 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
LYSMD2Q8IV50 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LYSMD2Q8IV50 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 TSPY9P-201ENST00000440215 945 ntBASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 TSPY11P-201ENST00000442607 1045 ntBASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 AC010525.1-201ENST00000585559 441 ntBASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.64■□□□□ 0.41
LYSMD2Q8IV50 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 AC239859.2-201ENST00000444165 318 ntBASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD2Q8IV50 CROCCP3-202ENST00000420820 1947 ntBASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 MIR6724-1-201ENST00000616420 92 ntBASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 MIR6724-2-201ENST00000616483 92 ntBASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 MIR6724-4-201ENST00000617390 92 ntBASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 MIR6724-3-201ENST00000622482 92 ntBASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD2Q8IV50 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms