Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 AC022517.1-201ENST00000592429 346 ntBASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CPNE8Q86YQ8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 AL162412.1-201ENST00000567129 965 ntBASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CPNE8Q86YQ8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE8Q86YQ8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE8Q86YQ8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE8Q86YQ8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.08■□□□□ 0.96
CPNE8Q86YQ8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 BID-214ENST00000617586 542 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPNE8Q86YQ8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 AC093787.1-201ENST00000450396 207 ntBASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 MIR5787-201ENST00000611784 55 ntBASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.06■□□□□ 0.96
CPNE8Q86YQ8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE8Q86YQ8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE8Q86YQ8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE8Q86YQ8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPNE8Q86YQ8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.05■□□□□ 0.96
CPNE8Q86YQ8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CPNE8Q86YQ8 AC116562.4-201ENST00000641316 2276 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms