Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
LCA10Q71F78 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LCA10Q71F78 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
LCA10Q71F78 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC10.82□□□□□ -0.68
LCA10Q71F78 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
LCA10Q71F78 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC10.82□□□□□ -0.68
LCA10Q71F78 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC10.82□□□□□ -0.68
LCA10Q71F78 CLTA-210ENST00000540080 989 ntTSL 2 BASIC10.82□□□□□ -0.68
LCA10Q71F78 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC10.82□□□□□ -0.68
LCA10Q71F78 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC10.82□□□□□ -0.68
LCA10Q71F78 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC10.82□□□□□ -0.68
LCA10Q71F78 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC10.82□□□□□ -0.68
LCA10Q71F78 C8orf49-201ENST00000525043 1968 ntBASIC10.82□□□□□ -0.68
LCA10Q71F78 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC10.82□□□□□ -0.68
LCA10Q71F78 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
LCA10Q71F78 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LCA10Q71F78 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC10.82□□□□□ -0.68
LCA10Q71F78 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC10.82□□□□□ -0.68
LCA10Q71F78 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC10.82□□□□□ -0.68
LCA10Q71F78 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LCA10Q71F78 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LCA10Q71F78 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LCA10Q71F78 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
LCA10Q71F78 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC10.81□□□□□ -0.68
LCA10Q71F78 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC10.81□□□□□ -0.68
LCA10Q71F78 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
LCA10Q71F78 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
LCA10Q71F78 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LCA10Q71F78 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LCA10Q71F78 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC10.81□□□□□ -0.68
LCA10Q71F78 AC009053.2-201ENST00000563701 2365 ntBASIC10.81□□□□□ -0.68
LCA10Q71F78 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 ASB1-202ENST00000409297 878 ntTSL 5 BASIC10.81□□□□□ -0.68
LCA10Q71F78 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC10.81□□□□□ -0.68
LCA10Q71F78 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LCA10Q71F78 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 AL031848.2-201ENST00000607670 837 ntBASIC10.81□□□□□ -0.68
LCA10Q71F78 MIR6722-201ENST00000617286 78 ntBASIC10.81□□□□□ -0.68
LCA10Q71F78 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC10.81□□□□□ -0.68
LCA10Q71F78 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC10.81□□□□□ -0.68
LCA10Q71F78 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LCA10Q71F78 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LCA10Q71F78 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
LCA10Q71F78 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 AP005212.1-201ENST00000581547 1997 ntBASIC10.81□□□□□ -0.68
LCA10Q71F78 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
LCA10Q71F78 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LCA10Q71F78 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LCA10Q71F78 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms